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New posts in snakemake

How to reference input in params section of snakemake rule?

python snakemake

Logging Snakemake's own console output - how to change what file Snakemake logs to?

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Why is Snakemake not seeing symbol link files?

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Why does setting `wildcard_constraints` in a snakefile prevent the deletion of files marked `temp`?

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Process multiple directories and all files within using snakemake

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Use of argparse in Snakemake script

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How to ignore Snakemake's "params have changed since last execution"?

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How to fix conda "ResolvePackageNotFound" when building a conda recipe

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How can I ignore changed code in Snakemake

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Snakemake - load cluster modules before an external script is called

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Use special symbols in Snakemake parameter section

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How to perform simple string operations in snakemake output

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How can I use a for loop to programmatically generate snakemake rules?

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Would it make sense to use Snakemake and Dask together?

python amazon-web-services dask snakemake

Snakemake - Wildcards in input files cannot be determined from output files

python python-3.x pipeline snakemake

snakemake: how to deal with variable number of output from a rule

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snakemake randomly identifying outputs as incomplete

python snakemake

fastqc using Snakemake

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using conda environments in simple snakemake workflows

conda snakemake

Snakemake: how to realize a mechanism to copy input/output files to/from tmp folder and apply rule there

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