Does anyone know a way to produce a nice publication quality LaTeX table from an lme4 mer
object? Neither the xtable
method (package xtable
) nor the latex
method (package Hmisc
) know how to deal with mer
objects.
For example, given this fit:
library(lme4)
fm1 <- lmer(Reaction ~ Days + (Days|Subject), sleepstudy)
Are there any options for producing a nice LaTeX table of the coefficient estimates for both the fixed and random effects?
EDIT:
Because this is somewhat buried in the comment threads below, note that a community wiki is in development for R LaTeX tables: Tools for making latex tables in R
The answer may be a bit late, but perhaps somebody may find it interesting:
library("texreg")
texreg(fm1)
To typeset multiple lme4 or other models side by side, use something like this:
texreg(list(fm1, fm2))
Here is a blog post that seems tailor made for this situation Latex Tables for lme4 Models
I may have a hacky solution. I wanted the same thing, specifically the table of coefficients from a glmer model fit (the estimates, SEs, z, and p values). Finding the right part of the summary output and feeding that into xtable seems to have done the trick. Apologies for not supplying reproducible code & data, but from your original example:
fm1 <- lmer(Reaction ~ Days + (Days|Subject), sleepstudy)
xtable(summary(fm1)@coef)
Should give you the table of coefficients, SEs, etc. Note that it just gives the values, not the extra dressing-up of significance stars, etc.
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