I am not able to knit html, pdf, or word. Same error each time:
"C:/Users/bosr/AppData/Local/Pandoc/pandoc" +RTS -K512m -RTS test.utf8.md --to docx --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash+smart --output test.docx --highlight-style tango
pandoc.exe: test.utf8.md: openBinaryFile: does not exist (No such file or directory)
Error: pandoc document conversion failed with error 1
Execution halted
I know there are many questions of this nature, but none that I have found have fixed my issue.
I installed R 3.6.1 and RStudio 1.2.1578 on a new Win 10 machine w/o admin rights. Managed to get everything working except Rmarkdown. My sessionInfo() is below. If I open a command prompt, pandoc is findable:
C:\>pandoc --version
pandoc 2.7.3
Compiled with pandoc-types 1.17.5.4, texmath 0.11.2.2, skylighting 0.8.1
Default user data directory: C:\Users\bosr\AppData\Roaming\pandoc
Copyright (C) 2006-2019 John MacFarlane
Web: http://pandoc.org
This is free software; see the source for copying conditions.
There is no warranty, not even for merchantability or fitness
for a particular purpose.
I have pandoc installed at C:\Users\bosr\AppData\Local\Pandoc\
I also tried @kevinushey's solution mentioned here which resulted in a second pandoc install at H:\rstudio-pandoc\
Both pandoc installs are in my path (user) environment variable which I am allowed to set.
I would be very grateful for any suggestions.
- Session info -------------------------------------------------------
setting value
version R version 3.6.1 (2019-07-05)
os Windows 10 x64
system x86_64, mingw32
ui RStudio
language (EN)
collate English_United States.1252
ctype English_United States.1252
tz America/New_York
date 2019-09-24
- Packages -----------------------------------------------------------
package * version date lib source
base64enc 0.1-3 2015-07-28 [1] CRAN (R 3.6.1)
digest 0.6.21 2019-09-20 [1] CRAN (R 3.6.1)
evaluate 0.14 2019-05-28 [1] CRAN (R 3.6.1)
glue 1.3.1 2019-03-12 [1] CRAN (R 3.6.1)
highr 0.8 2019-03-20 [1] CRAN (R 3.6.1)
htmltools 0.3.6 2017-04-28 [1] CRAN (R 3.6.1)
jsonlite 1.6 2018-12-07 [1] CRAN (R 3.6.1)
knitr 1.25.1 2019-09-24 [1] Github (yihui/knitr@11ddfc6)
magrittr 1.5 2014-11-22 [1] CRAN (R 3.6.1)
markdown 1.1 2019-08-07 [1] CRAN (R 3.6.1)
mime 0.7 2019-06-11 [1] CRAN (R 3.6.0)
Rcpp 1.0.2 2019-07-25 [1] CRAN (R 3.6.1)
rmarkdown 1.15 2019-08-21 [1] CRAN (R 3.6.1)
stringi 1.4.3 2019-03-12 [1] CRAN (R 3.6.0)
stringr 1.4.0 2019-02-10 [1] CRAN (R 3.6.1)
tinytex 0.16 2019-09-17 [1] CRAN (R 3.6.1)
xfun 0.9 2019-08-21 [1] CRAN (R 3.6.1)
yaml 2.2.0 2018-07-25 [1] CRAN (R 3.6.0)
[1] C:/Users/bosr/R/R-3.6.1/library
[2] C:/pit
Update: I had IT install pandoc using the admin password, and I am still getting the same error:
"C:/PROGRA~1/Pandoc/pandoc" +RTS -K512m -RTS riskNotes.utf8.md --to latex --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash --output riskReport_20190925.tex --table-of-contents --toc-depth 2 --template "C:\Users\bosr\R\R-3.6.1\library\rmarkdown\rmd\latex\default-1.17.0.2.tex" --no-highlight --pdf-engine pdflatex --variable graphics=yes --variable "compact-title:yes"
pandoc.exe: riskNotes.utf8.md: openBinaryFile: does not exist (No such file or directory)
Error: pandoc document conversion failed with error 1
In addition: There were 22 warnings (use warnings() to see them)
Ok, I see now this is due to the file being saved on a network drive. See here. There is no fix yet. Too bad.
If you love us? You can donate to us via Paypal or buy me a coffee so we can maintain and grow! Thank you!
Donate Us With