I have some questions about purrr::pmap to make multiple plots of ggplot in nested.data.frame.
I can run below code without problem by using purrr::map2 and I can make multiplots(2 plots) in nested.data.frame.
As a example, I used the iris dataset in R.
library(tidyverse)
iris0 <- iris
iris0 <-
iris0 %>%
group_by(Species) %>%
nest() %>%
mutate(gg1 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Sepal.Width)) + geom_point())) %>%
mutate(gg2 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Petal.Width)) + geom_point())) %>%
mutate(g = purrr::map2(gg1, gg2, ~ gridExtra::grid.arrange(.x, .y)))
But, when I want to plot more than 2 plots, I can't solve using purrr::pmap like below code.
iris0 <-
iris0 %>%
group_by(Species) %>%
nest() %>%
mutate(gg1 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Sepal.Width)) + geom_point())) %>%
mutate(gg2 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Petal.Width)) + geom_point())) %>%
mutate(gg3 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Petal.Length)) + geom_point())) %>%
mutate(g = purrr::pmap(gg1, gg2,gg3, ~ gridExtra::grid.arrange(.x, .y, .z)))
> Error in mutate_impl(.data, dots) : Index 1 is not a length 1 vector
Is there is a way of solving this problem in nested.data.frame ? Please give me some advices or answers.
Combine the plots over multiple pagesThe function ggarrange() [ggpubr] provides a convenient solution to arrange multiple ggplots over multiple pages. After specifying the arguments nrow and ncol, ggarrange()` computes automatically the number of pages required to hold the list of the plots.
The basic solution is to use the gridExtra R package, which comes with the following functions: grid. arrange() and arrangeGrob() to arrange multiple ggplots on one page. marrangeGrob() for arranging multiple ggplots over multiple pages.
The base function ggplot() is responsible for creating the coordinate system in which the plot will be display.
To save multiple ggplots using for loop, you need to call the function print() explicitly to plot a ggplot to a device such as PDF, PNG, JPG file. Enjoyed this article?
purrr::pmap
takes (at least) two arguments:
pmap(.l, .f, ...)
where
.l: A list of lists. The length of '.l' determines the number of
arguments that '.f' will be called with. List names will be
used if present.
.f: A function, formula, or atomic vector.
Further, .x
and .y
work well for only two arguments, but (in the same man page) it says For more arguments, use '..1', '..2', '..3' etc
.
For readability (and a little efficiency), I'll combine all of the individual calls to mutate
into one; you can keep them separate if needed (esp if there is more to the code than you show in this reduced example):
library(dplyr)
library(tidyr)
library(purrr)
library(ggplot2)
iris0 <- iris %>%
group_by(Species) %>%
nest() %>%
mutate(
gg1 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Sepal.Width)) + geom_point()),
gg2 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Petal.Width)) + geom_point()),
gg3 = purrr::map(data, ~ ggplot(., aes(Sepal.Length, Petal.Length)) + geom_point()),
g = purrr::pmap(list(gg1, gg2, gg3), ~ gridExtra::grid.arrange(..1, ..2, ..3))
)
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