I used Compare Plugin in Notepad++. I want copy only highlighted lines. The lines are not bookmarked.
http://img96.imageshack.us/img96/4524/highlightlines.png
Go to Search menu and select mark option.. (Ctrl+M) Enter what you want to find and click mark all option then click on copy marked text and paste wherever you want.
The only way I have found to do this so far, and it's not ideal if there are loads of lines that are different, is this.
You can then paste the lines wherever you want. I'm not sure if maybe you could write this into a macro.
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