In trying to install the package tidyverse
, I get errors in the installation of dependency tidyr
.
Here is the tail of the message I get:
cpp11.cpp:31:100: error: ‘unmove’ is not a member of ‘cpp11’
return cpp11::as_sexp(simplifyPieces(cpp11::unmove(cpp11::as_cpp<cpp11::list>(pieces)), cpp11::unmove(cpp11::as_cpp<int>(p)), cpp11::unmove(cpp11::as_cpp<bool>(fillLeft))));
^~~~~~
cpp11.cpp:31:138: error: ‘unmove’ is not a member of ‘cpp11’
return cpp11::as_sexp(simplifyPieces(cpp11::unmove(cpp11::as_cpp<cpp11::list>(pieces)), cpp11::unmove(cpp11::as_cpp<int>(p)), cpp11::unmove(cpp11::as_cpp<bool>(fillLeft))));
^~~~~~
/usr/lib/R/etc/Makeconf:176: recipe for target 'cpp11.o' failed
make: *** [cpp11.o] Error 1
ERROR: compilation failed for package ‘tidyr’
* removing ‘/home/xxx/yyy/tidyr’
Warning in install.packages :
installation of package ‘tidyr’ had non-zero exit status
To my naive eye, it would seem the issue lies with cpp11. I saw a similar question regarding tidyr installation error due to cpp11 compilation error (R tidyr package installation failed due to cpp11 compilation error (expansion pattern x contains no argument packs)), but it was for a RHEL system.
I have the latest version of gcc/c++ installed on my system (4:7.4.0-1ubuntu2.3). The latest version of system dependencies libcurl4-openssl-dev libssl-dev libxml2-dev
are also installed.
Here is the output of sessionInfo()
:
R version 4.0.2 (2020-06-22)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.5 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
locale:
[1] LC_CTYPE=en_CA.UTF-8 LC_NUMERIC=C LC_TIME=en_CA.UTF-8 LC_COLLATE=en_CA.UTF-8 LC_MONETARY=en_CA.UTF-8 LC_MESSAGES=en_CA.UTF-8
[7] LC_PAPER=en_CA.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] rstudioapi_0.11 magrittr_1.5 usethis_1.6.1 devtools_2.3.1 pkgload_1.1.0 R6_2.4.1 rlang_0.4.7 fansi_0.4.1 tools_4.0.2
[10] pkgbuild_1.1.0 sessioninfo_1.1.1 cli_2.0.2 withr_2.2.0 ellipsis_0.3.1 remotes_2.2.0 assertthat_0.2.1 digest_0.6.25 rprojroot_1.3-2
[19] crayon_1.3.4 processx_3.4.3 callr_3.4.3 fs_1.5.0 ps_1.3.3 curl_4.3 testthat_2.3.2 memoise_1.1.0 glue_1.4.1
[28] compiler_4.0.2 desc_1.2.0 backports_1.1.8 prettyunits_1.1.1
It looks like @hadley released an update to tidyr a few days ago, based on the new cpp11 package: https://github.com/tidyverse/tidyr/releases.
For some reason, this caused tidyr to not build for us.
Our (hopefully temporary!) workaround was like this:
(1) Remove dependency on tidyverse
. Instead, explicitly depend on the subpackages( like dplyr/ggplot2/etc. )
(2) Install tidyr in the following way:
packageurl <- "https://cran.r-project.org/src/contrib/Archive/tidyr/tidyr_1.1.0.tar.gz"
install.packages(packageurl, repos=NULL, type="source")
Looks like the following commit is addressing this, though not sure when it will be pushed to CRAN: https://github.com/r-lib/cpp11/commit/779669a4d0b07e9f9d9382114f44e4f6ff68eebb
I found the following here: https://github.com/tidyverse/tidyr/issues/1024
The workaround consists in downgrading cpp11 to version 0.1:
devtools::install_version("cpp11", version = "0.1", repos = "http://cran.us.r-project.org")
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