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Using Rcpp with Windows-specific includes

Tags:

r

rcpp

I'm trying to write some C++ code that accesses some OS-level things in Windows, using Rcpp. As soon as I include windows.h or shlobj.h, I get a bunch of compilation errors. When I run this code, it works, so I know I'm getting some of the basics right. But when I uncomment either of the Windows-related #include lines, it doesn't work.

library(inline)

inc <- '
#include <iostream>
#include <stdio.h>
// #include <windows.h>
// #include <shlobj.h>

using namespace std;
'

src <- '
    cout << "foo\\n";
    printf("foo2\\n");

    return Rcpp::wrap(20);
'

fun <- cxxfunction(signature(),
                   includes = inc,
                   src, plugin="Rcpp")
fun()

Note: When I run this in RStudio, the output from cout and printf appear in the console, but when I run it from the Windows RGui, the output doesn't appear. I assume this has something to do with the way RGui handles text output.

When I uncomment those include lines, the errors I get look like this:

In file included from c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objbase.h:154:0,
                 from c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/ole2.h:16,
                 from c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/windows.h:94,
                 from file43c2f9e3518.cpp:22:
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objidl.h:598:52: error: macro "Realloc" requires 3 arguments, but only 2 given
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objidl.h:598:56: error: ISO C++ forbids initialization of member 'Realloc' [-fpermissive]
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objidl.h:598:56: error: making 'Realloc' static [-fpermissive]

... and so on

Any hints on how to make this work?


Update: I managed to get some of the errors to go away, but some remain.

I also got of the Realloc errors by following some advice from http://tolstoy.newcastle.edu.au/R/e2/devel/06/11/1242.html

The inc should be replaced with:

inc <- '
#include <iostream>
#include <stdio.h>

// This is taken from http://tolstoy.newcastle.edu.au/R/e2/devel/06/11/1242.html
#include <R.h>
#undef Realloc
#define R_Realloc(p,n,t) (t *) R_chk_realloc( (void *)(p), (size_t)((n) * sizeof(t)) )
#include <shlobj.h>

using namespace std;
'

I also got rid of other errors by passing -fpermissive to the compiler, as from this question: How to set g++ compiler flags using Rcpp and inline?

settings <- getPlugin("Rcpp")
settings$env$PKG_CXXFLAGS <- paste('-fpermissive',settings$env$PKG_CXXFLAGS,sep=' ')

fun <- cxxfunction(signature(), includes = inc,
                   src, plugin = "Rcpp",
                   settings = settings)
Sys.unsetenv('PKG_CXXFLAGS')

But there are still some errors:

In file included from c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objbase.h:154:0,
                 from c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/ole2.h:16,
                 from c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/shlobj.h:86,
                 from file43c267d3279.cpp:26:
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objidl.h:599:25: error: expected identifier before '(' token
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objidl.h:599:25: error: 'parameter' declared as function returning a function
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/objidl.h:599:25: error: expected ')' before ',' token
like image 207
wch Avatar asked Jul 21 '12 01:07

wch


2 Answers

I figured out the last problem. It looks like both the R and Windows headers define Realloc and Free, but there's some conflict between the definitions. So I needed to #undef both of those macros before including the Windows headers. And there's also the matter of passing the -fpermissive flag to the compiler.

library(Rcpp)
library(inline)

inc <- '
// Taken from http://tolstoy.newcastle.edu.au/R/e2/devel/06/11/1242.html
// Undefine the Realloc macro, which is defined by both R and by Windows stuff
#undef Realloc
// Also need to undefine the Free macro
#undef Free

#include <windows.h>

#include <iostream>
#include <stdio.h>

using namespace std;
'

src <- '
    cout << "foo\\n";
    printf("foo2\\n");

    return Rcpp::wrap(20);
'


# Need this for the Windows headers to work
# Set -fpermissive, from: http://stackoverflow.com/questions/7063265/how-to-set-g-compiler-flags-using-rcpp-and-inline
settings <- getPlugin("Rcpp")
settings$env$PKG_CXXFLAGS <- paste('-fpermissive',settings$env$PKG_CXXFLAGS,sep=' ')

fun <- cxxfunction(signature(),
                   includes = inc,
                   src,
                   plugin = "Rcpp",
                   settings = settings)

fun()
like image 159
wch Avatar answered Oct 12 '22 10:10

wch


At a first approximation, you can only build with Rcpp if you can build with R itself as Rcpp just makes the API nicer with a lot of C++ glue and template magic.

So unless you get these headers to build in a program with R alone, I don't see how it could build with Rcpp.

like image 3
Dirk Eddelbuettel Avatar answered Oct 12 '22 09:10

Dirk Eddelbuettel