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The following are my r code.
```{r message=FALSE, warning=FALSE, cache=0,eval=TRUE, error=FALSE}
stan_m1 <- rethinking::map2stan(
alist(
y ~ dbinom(n, p),
logit(p) <- alpha + bP*P + bA*A + bV*V,
alpha ~ dnorm(0, 10),
bP ~ dnorm(0, 5),
bA ~ dnorm(0, 5),
bV ~ dnorm(0, 5)
),
data = d1, chains=2 , iter=2500 , warmup=500, debug=FALSE ,
verbose=FALSE,refresh=-1
)
When I knit my rmarkdown file as html output, I am getting following output. Is there any way to turn off these messages?
819
You use results="hide" to hide the results/output (but here the code would still be displayed). You use include=FALSE to have the chunk evaluated, but neither the code nor its output displayed.
include = FALSE prevents code and results from appearing in the finished file. R Markdown still runs the code in the chunk, and the results can be used by other chunks. echo = FALSE prevents code, but not the results from appearing in the finished file. This is a useful way to embed figures.
If you prefer to use the console by default for all your R Markdown documents (restoring the behavior in previous versions of RStudio), you can make Chunk Output in Console the default: Tools -> Options -> R Markdown -> Show output inline for all R Markdown documents .
Put results="hide" in your chunk header.
And, in rstan 2.18.2 or later you can specify the refresh = 0 argument to accomplish the same thing.
103
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