SonarQube does not analyze files after upgrade from 4.2 to 4.3

Question

After the upgrade of sonarqube 4.2 to 4.3 i'm getting this message:

13:15:18.349 WARN - File '%s' is ignored. It is not located in module basedir '%s'. [repeated for (assuming) all my c# files]

13:15:18.349 INFO - 0 files indexed

We run sonar from msbuild, and pass in (among others) the command line argument: -D sonar.sources="../../Source/"

Which is correctly resolved the full path is can see in the logging

the output displays

C:\projects\myproject\build\Tools\SonarRunner.2.3\bin..

SonarQube Runner 2.3

Java 1.7.0_51 Oracle Corporation (64-bit)

Windows 8 6.2 amd64

INFO: Runner configuration file: C:\projects\project\build\Tools\SonarRunner.2.3\bin..\conf\sonar-runner.properties

INFO: Project configuration file: NONE

INFO: Default locale: "en_GB", source code encoding: "UTF-8"

INFO: Work directory: C:\projects\project\Build\Scripts.sonar

INFO: SonarQube Server 4.3

13:13:43.706 INFO - Load batch settings

13:13:43.924 INFO - User cache: C:\Users\username.sonar\cache

13:15:16.155 INFO - No quality gate is configured.

13:15:16.356 INFO - Base dir: C:\projects\project\Build\Scripts

13:15:16.356 INFO - Working dir: C:\projects\project\Build\Scripts.sonar

13:15:16.356 INFO - Source dirs: C:\projects\project\Source

13:15:16.356 INFO - Source encoding: UTF-8, default locale: en_GB

13:15:16.356 INFO - Index files

13:15:16.358 INFO - Excluded tests:

13:15:16.358 INFO - /.IntegrationTests//.*

13:15:16.358 INFO - /.UnitTests//.*

13:15:17.287 WARN - File '%s' is ignored. It is not located in module basedi r '%s'.

Any suggestions on how to solve this?

Answer 1

This may help (update: url no longer available: Alternative)

"Module base directory can be specified for special cases By default, the module base directory is guessed from the module identifier (like in the examples above). But it can be redefined using the sonar.projectBaseDir property."