I have a named list of vectors that represent events originated from 2 samples, "A" and "B":
l.temp <- list(
SF1_t_A = c(rep(1:10)),
SF2_t_A = c(rep(9:15)),
SF1_t_B = c(rep(8:12)))
l.temp
$SF1_t_A
[1] 1 2 3 4 5 6 7 8 9 10
$SF2_t_A
[1] 9 10 11 12 13 14 15
$SF1_t_B
[1] 8 9 10 11 12
Now I want select only the elements of the list that are either from sample "A" or "B". I could go about doing it with a loop but that sort of defies the point of using list when plyr is around. This, and variations, is what I've tried so far:
llply(l.temp , function(l){
if ((unlist(strsplit(names(l), "_"))[3]) == "A"){
return(l)}
})
This is the error I am getting:
Error in unlist(strsplit(names(l), "_")) :
error in evaluating the argument 'x' in selecting a method for function 'unlist':
Error in strsplit(names(l), "_") : non-character argument
Help on what I am doing wrong is appreciated.
You can find the pattern in the names of the list, which gives you an index of which ones:
grep("_A$", names(l.temp))
And then use it to subset:
l.temp[grep("_A$", names(l.temp))]
If you love us? You can donate to us via Paypal or buy me a coffee so we can maintain and grow! Thank you!
Donate Us With