I'm trying to make an algorithm that searchs and returns a path between two nodes in a graph in xQuery, i've had no luck so far as it returns just one node and it's adyacent nodes.
First i should make clear that the graph is a directed graph and every node can have zero, one or more origins, in the XML a node only has the link to it's origin but not to it's following nodes
Here's an example of some nodes and their XML
<node>
<id> 123-456-789</id>
<name> something </name>
<Links>
<Link>
<origin></origin>
</Link>
<Links>
<node>
<id> 245-678-901</id>
<name> node 2</name>
<Links>
<Link>
<origin> 123-456-789 </origin>
</Link>
<Links>
<node>
<id> xxx-xxx-xxx</id>
<name> node 3</name>
<Links>
<Link>
<origin> 123-456-789 </origin>
</Link>
<Links>
<node>
<id> 234-546-768</id>
<name> node 4</name>
<Links>
<Link>
<origin> 245-678-901</origin>
</Link>
<Links>
From that XML i would like to get the path from node 1 to node 4 ( node1-> node2 -> node4) but whatever i try to do would just give me node1-node2 and node3 but not node4 another thing is that i want to select a path that is not direct, i mean, if i want the path between node5 and node7 but both node5 and node7 are directed towards node6
I've tried adapting this python code to xquery
def BFS(graph,start,end,q):
temp_path = [start]
q.enqueue(temp_path)
while q.IsEmpty() == False:
tmp_path = q.dequeue()
last_node = tmp_path[len(tmp_path)-1]
print tmp_path
if last_node == end:
print "VALID_PATH : ",tmp_path
for link_node in graph[last_node]:
if link_node not in tmp_path:
new_path = []
new_path = tmp_path + [link_node]
q.enqueue(new_path)
(code not mine, it belongs to it's rightful coder at this activestate page)
here is what i've tried to do:
declare function local:BFS($graph as element()* , $ini_node as element(Node)*, $end_node as element(Node)*) as element()*
{
let $seq := $ini_node
let $queue := ($seq)
for $item in $queue
return
if ( count($queue) > 0) then
let $seq := remove($queue, count($queue))
let $last := $seq[last()] return if (deep-equal($last, $end_node)) then $seq
else
for $node in $graph[contains(.,$graph/id[contains(.,$last/Links/Link/origin/text())])] (: what i've tried was to get the graph nodes which id is equal to the origins of the last node :)
return if(not(functx:is-node-in-sequence-deep-equal($node,$seq))) then
let $new_path:= ()
let $new_path:= insert-before($seq, count($seq)+1, $node)
let $queue := insert-before($queue,1, $new_path) return $queue
else ()
else
()
};
Approach: Either Breadth First Search (BFS) or Depth First Search (DFS) can be used to find path between two vertices. Take the first vertex as a source in BFS (or DFS), follow the standard BFS (or DFS). If the second vertex is found in our traversal, then return true else return false.
Approach 1Create a graph using the given nodes and a queue for storing the nodes to iterate through breadth-first search. Push v1 to the queue and start Breadth-first search till the queue is not empty. Iterate through all the connected nodes from the current node. Update the parent of new nodes.
The fundamental difference between XQuery and Python is that XQuery is a functional programming language. This means that the value bound to a variable cannot be modified afterwards. In your function local:BFS(...)
for example you cannot change the value of $queue
inside the loop, all you do is create a new variable $queue
that shadows the outer one.
In order to get it to work, you can write the outer loop as a recursive function instead that takes the current queue as an argument. Each iteration of the loop is then one invocation of the function with an updated version of the queue:
declare function local:BFS($graph, $queue, $steps, $end) {
if(empty($queue)) then error(xs:QName('local:NOTFOUND'), 'No path found.')
else (
let $curr := $queue[1], $rest-queue := $queue[position() > 1]
return (
if($curr eq $end) then local:result($steps, $end)
else (
let $successors :=
$graph//node[Links/Link/origin = $curr and not($steps/@to = id)]/id/string()
let $new-steps :=
for $succ in $successors
return <edge from="{$curr}" to="{$succ}" />
return local:BFS(
$graph,
($rest-queue, $successors),
($steps, $new-steps),
$end
)
)
)
)
};
It can be called by supplying the first edge to the start node:
declare function local:BFS($graph, $start, $end) {
local:BFS($graph, $start, <edge to="{$start}" />, $end)
};
All used edges are stored in $steps
. In order to reconstruct the path after we found the destination, we can just traverse them backwards until we find the initial edge:
declare function local:result($steps, $dest) {
let $pred := $steps[@to = $dest]/@from/string()
return if(exists($pred)) then (local:result($steps, $pred), $dest)
else $dest
};
If you are concerned about performance, XQuery sequences are probably not the best data structure to use as a queue. The same can be said about XML fragments for lookups. So if you have access to an XQuery 3.0 processor, you can have a look at some (at least asymptotically) more efficient data structures I wrote at https://github.com/LeoWoerteler/xq-modules. I even included Dijkstra's algorithm as an example.
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