I have a large data table in R:
library(data.table)
set.seed(1234)
n <- 1e+07*2
DT <- data.table(
ID=sample(1:200000, n, replace=TRUE),
Month=sample(1:12, n, replace=TRUE),
Category=sample(1:1000, n, replace=TRUE),
Qty=runif(n)*500,
key=c('ID', 'Month')
)
dim(DT)
I'd like to pivot this data.table, such that Category becomes a column. Unfortunately, since the number of categories isn't constant within groups, I can't use this answer.
Any ideas how I might do this?
/edit: Based on joran's comments and flodel's answer, we're really reshaping the following data.table
:
agg <- DT[, list(Qty = sum(Qty)), by = c("ID", "Month", "Category")]
This reshape can be accomplished a number of ways (I've gotten some good answers so far), but what I'm really looking for is something that will scale well to a data.table
with millions of rows and hundreds to thousands of categories.
data.table
implements faster versions of melt/dcast
data.table specific methods (in C). It also adds additional features for melting and casting multiple columns. Please see the Efficient reshaping using data.tables vignette.
Note that we don't need to load reshape2
package.
library(data.table)
set.seed(1234)
n <- 1e+07*2
DT <- data.table(
ID=sample(1:200000, n, replace=TRUE),
Month=sample(1:12, n, replace=TRUE),
Category=sample(1:800, n, replace=TRUE), ## to get to <= 2 billion limit
Qty=runif(n),
key=c('ID', 'Month')
)
dim(DT)
> system.time(ans <- dcast(DT, ID + Month ~ Category, fun=sum))
# user system elapsed
# 65.924 20.577 86.987
> dim(ans)
# [1] 2399401 802
Like that?
agg <- DT[, list(Qty = sum(Qty)), by = c("ID", "Month", "Category")]
reshape(agg, v.names = "Qty", idvar = c("ID", "Month"),
timevar = "Category", direction = "wide")
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