I have a table like below, I want to add a column to data using the if-else command, and I used two command lines as below:
table:
A B C
G1 0.04 0.2
G2 0.02 -0.5
G3 0.9 0.1
Codes that I have used:
1)
table$DE <-
if (table$B < 0.05 & table$C> 0)
{
print("UP")
} else if (table$B < 0.05 &
table$C < 0) {
print("Down")
} else {
print("NotSig")
}
[1] "NotSig"
Warning messages:
1: In if (table_UGP2$FDR_NCS_H9_KO < 0.05 & table_UGP2$logFC_NCS_H9_KO > :
the condition has length > 1 and only the first element will be used
2: In if (table_UGP2$FDR_NCS_H9_KO < 0.05 & table_UGP2$logFC_NCS_H9_KO < :
the condition has length > 1 and only the first element will be used
2) table$DE <- function(table) {
ifelse(table$B < 0.05 & table$C>
0,"UP",ifelse(table$B < 0.05 &
table$C < 0,"Down","NotSig"))
}
Error in rep(value, length.out = nrows) :
attempt to replicate an object of type 'closure'
Desired output:
A B C DE
G1 0.04 0.2 Up
G2 0.02 -0.5 Down
G3 0.9 0.1 NotSig
Just for fun, here is a solution without any ifs or elses:
table <- within(tab,
D <- factor((B <= 0.05) * (1 + (C >= 0)),
levels = 0:2,
labels = c("NotSig", "Down", "Up"))
)
table
A B C D
1 G1 0.04 0.2 Up
2 G2 0.02 -0.5 Down
3 G3 0.90 0.1 NotSig
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