I'm new with Rcpp. I have read Advanced R by Hadley Wickham and all Rcpp vignettes but i can't figure how to manipulate NumericMatrix
objects.
Is there any simple way to do things like this R
code
mat <- matrix(1:9,3,3)
v <- matrix(2,2,2)
mat[1,] <- NA
mat[,3] <- 0.5
mat[2:3,2:3] <- v
other than looping on rows and columns and setting the value of each mat[i,j]
?
Edit3 : Ok let's try again.
Here's my cpp file :
#include <Rcpp.h>
using namespace Rcpp;
// [[Rcpp::export]]
NumericMatrix lissage_incapC(NumericMatrix mat) {
// INIT
NumericMatrix x(mat.nrow()+1,mat.ncol()+1);
NumericMatrix out(mat.nrow(),mat.ncol());
// Here i want to set x first row and first column to NA_REAL //**1
for(int i=0; i<x.nrow(); i++){
for(int j=0; j<x.ncol(); j++){
if(i==0 || j==0)
x(i,j) = NA_REAL;
x(i,j) = mat(i-1,j-1);
}
}
for(int i=8; i<x.nrow()-1; i++){
for(int j=1; j<x.ncol()-1; j++){
NumericMatrix y = x(Range(i-1,i+1),Range(j-1,j+1));
y(1,1) = NA_REAL;
if((i == 8) & (j>1))
y.row(0) = NumericVector::get_na(); //problem here
out(i,j-1) = 1/2*x(i,j) + 1/2 * mean(na_omit(y));
}
}
out(_,out.ncol()) = 0.5; // Problem here
out(Range(0,7),_) = out(8,_); // Problem here
return out;
}
I've pointed my problem in comments. In the first one (//**1) i have to write two loops to set first row and first column. What i'm asking is : is there any simpler way to do it, like we can do in R?
This is the same issue i have pointed out in my code's comments.
Technically yes, though it's only a sugar IIRC. Here's a short demo:
library(inline)
src <- '
Rcpp::NumericMatrix Am(A);
NumericVector na_vec(Am.ncol(), NA_REAL);
Am(0, _) = na_vec;
Am(_, 0) = na_vec;
return Am;
'
f <- cxxfunction(signature(A = "numeric"), body = src, plugin = "Rcpp")
f(matrix(1, 3, 3))
# [,1] [,2] [,3]
#[1,] NA NA NA
#[2,] NA 1 1
#[3,] NA 1 1
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