I would like to plot something like this (from this paper) where icons, in this case small graphs, are used as tick labels.
I get this far, where icons are more or less properly placed: This is the code:
library(igraph)
npoints <- 15
y <- rexp(npoints)
x <- seq(npoints)
par(fig=c(0.05,1,0.3,1), new=FALSE)
plot(y, xlab=NA, xaxt='n', pch=15, cex=2, col="red")
lines(y, col='red', lwd=2)
xspan <- 0.9
xoffset <- (0.07+0.5/npoints)*xspan
for(i in 1:npoints){
x1 <- (xoffset+(i-1)/npoints)*xspan
x2 <- min(xspan*(xoffset+(i)/npoints),1)
par(fig=c(x1,x2,0,0.5), new=TRUE)
plot(graph.ring(i), vertex.label=NA)
}
However, if the number of points grows (e.g. npoints <- 15
) it complains because there is no place for the icons:
Error in plot.new() : figure margins too large
I wonder wether there is a more natural way to do this so that it works for any (reasonable) number of points.
Any advice is welcome.
To set labels for X and Y axes in R plot, call plot() function and along with the data to be plot, pass required string values for the X and Y axes labels to the “xlab” and “ylab” parameters respectively. By default X-axis label is set to “x”, and Y-axis label is set to “y”.
Method 1: Using barplot() To display all the labels, we need to rotate the axis, and we do it using the las parameter. To rotate the label perpendicular to the axis we set the value of las as 2, and for horizontal rotation, we set the value as 1. Secondly, to increase the font size of the labels we use cex.
Changing axis labels To alter the labels on the axis, add the code +labs(y= "y axis name", x = "x axis name") to your line of basic ggplot code. Note: You can also use +labs(title = "Title") which is equivalent to ggtitle .
Right-click the category labels you want to change, and click Select Data. In the Horizontal (Category) Axis Labels box, click Edit. In the Axis label range box, enter the labels you want to use, separated by commas.
library(igraph)
npoints <- 15
y <- rexp(npoints)
x <- seq(npoints)
# reserve some extra space on bottom margin (outer margin)
par(oma=c(3,0,0,0))
plot(y, xlab=NA, xaxt='n', pch=15, cex=2, col="red")
lines(y, col='red', lwd=2)
# graph numbers
x = 1:npoints
# add offset to first graph for centering
x[1] = x[1] + 0.4
x1 = grconvertX(x=x-0.4, from = 'user', to = 'ndc')
x2 = grconvertX(x=x+0.4, from = 'user', to = 'ndc')
# abline(v=1:npoints, xpd=NA)
for(i in x){
print(paste(i, x1[i], x2[i], sep='; '))
# remove plot margins (mar) around igraphs, so they appear bigger and
# `figure margins too large' error is avoided
par(fig=c(x1[i],x2[i],0,0.2), new=TRUE, mar=c(0,0,0,0))
plot(graph.ring(i), vertex.label=NA)
# uncomment to draw box around plot to verify proper alignment:
# box()
}
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