In Eclipse IDE you have the concept of "workspaces" allowing you to manage/view your projects in one side pane easily and allowing you to switch between projects easily.
As i gather IntelliJ doesn't have that feature because everytime when i open a new project it always asks to either open in a different window or same window? And in the latter option it overrides my existing open project.
You're right; IntelliJ simply doesn't have this functionality. Each project is opened in a single window, either overwriting your current window or spawning a new window.
If you feel that this sort of behavior is something you want, then feel encouraged to put in a feature request on their issue tracker.
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