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How to group DataFrame by a period of time?

Tags:

python

pandas

I have some data from log files and would like to group entries by a minute:

 def gen(date, count=10):      while count > 0:          yield date, "event{}".format(randint(1,9)), "source{}".format(randint(1,3))          count -= 1          date += DateOffset(seconds=randint(40))   df = DataFrame.from_records(list(gen(datetime(2012,1,1,12, 30))), index='Time', columns=['Time', 'Event', 'Source']) 

df:

 Event  Source  2012-01-01 12:30:00     event3  source1  2012-01-01 12:30:12     event2  source2  2012-01-01 12:30:12     event2  source2  2012-01-01 12:30:29     event6  source1  2012-01-01 12:30:38     event1  source1  2012-01-01 12:31:05     event4  source2  2012-01-01 12:31:38     event4  source1  2012-01-01 12:31:44     event5  source1  2012-01-01 12:31:48     event5  source2  2012-01-01 12:32:23     event6  source1 

I tried these options:

  1. df.resample('Min') is too high level and wants to aggregate.
  2. df.groupby(date_range(datetime(2012,1,1,12, 30), freq='Min', periods=4)) fails with exception.
  3. df.groupby(TimeGrouper(freq='Min')) works fine and returns a DataFrameGroupBy object for further processing, e.g.:

    grouped = df.groupby(TimeGrouper(freq='Min')) grouped.Source.value_counts() 2012-01-01 12:30:00  source1    1 2012-01-01 12:31:00  source2    2                      source1    2 2012-01-01 12:32:00  source2    2                      source1    2 2012-01-01 12:33:00  source1    1 

However, the TimeGrouper class is not documented.

What is the correct way to group by a period of time? How can I group the data by a minute AND by the Source column, e.g. groupby([TimeGrouper(freq='Min'), df.Source])?

like image 717
serguei Avatar asked Jun 17 '12 18:06

serguei


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2 Answers

You can group on any array/Series of the same length as your DataFrame --- even a computed factor that's not actually a column of the DataFrame. So to group by minute you can do:

df.groupby(df.index.map(lambda t: t.minute)) 

If you want to group by minute and something else, just mix the above with the column you want to use:

df.groupby([df.index.map(lambda t: t.minute), 'Source']) 

Personally I find it useful to just add columns to the DataFrame to store some of these computed things (e.g., a "Minute" column) if I want to group by them often, since it makes the grouping code less verbose.

Or you could try something like this:

df.groupby([df['Source'],pd.TimeGrouper(freq='Min')]) 
like image 105
BrenBarn Avatar answered Oct 17 '22 02:10

BrenBarn


Since the original answer is rather old and pandas introduced periods a different solution is nowadays:

df.groupby(df.index.to_period('T')) 

Additionally, you can resample

df.resample('T') 
like image 31
Quickbeam2k1 Avatar answered Oct 17 '22 03:10

Quickbeam2k1