I have a file temp.txt, that I want to sort with the sort
command in bash.
I want the sorted results to replace the original file.
This doesn't work for example (I get an empty file):
sortx temp.txt > temp.txt
Can this be done in one line without resorting to copying to temporary files?
EDIT: The -o
option is very cool for sort
. I used sort
in my question as an example. I run into the same problem with other commands:
uniq temp.txt > temp.txt.
Is there a better general solution?
Command line editing is enabled by default when using an interactive shell, unless the --noediting option is supplied at shell invocation. Line editing is also used when using the -e option to the read builtin command (see Bash Builtins). By default, the line editing commands are similar to those of Emacs.
sort temp.txt -o temp.txt
A sort
needs to see all input before it can start to output. For this reason, the sort
program can easily offer an option to modify a file in-place:
sort temp.txt -o temp.txt
Specifically, the documentation of GNU sort
says:
Normally, sort reads all input before opening output-file, so you can safely sort a file in place by using commands like
sort -o F F
andcat F | sort -o F
. However,sort
with--merge
(-m
) can open the output file before reading all input, so a command likecat F | sort -m -o F - G
is not safe as sort might start writingF
beforecat
is done reading it.
While the documentation of BSD sort
says:
If [the] output-file is one of the input files, sort copies it to a temporary file before sorting and writing the output to [the] output-file.
Commands such as uniq
can start writing output before they finish reading the input. These commands typically do not support in-place editing (and it would be harder for them to support this feature).
You typically work around this with a temporary file, or if you absolutely want to avoid having an intermediate file, you could use a buffer to store the complete result before writing it out. For example, with perl
:
uniq temp.txt | perl -e 'undef $/; $_ = <>; open(OUT,">temp.txt"); print OUT;'
Here, the perl part reads the complete output from uniq
in variable $_
and then overwrites the original file with this data. You could do the same in the scripting language of your choice, perhaps even in Bash. But note that it will need enough memory to store the entire file, this is not advisable when working with large files.
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