I have a file reader that reads n bytes from a file and returns a string of chars representing that (binary) data. I want to read up n bytes into a numpy array of numbers and run a FFT on it, but I'm having trouble creating an array from a string. A couple lines of example would be awesome.
Edit:
I'm reading raw binary data, and so the string I get looks like '\x01\x05\x03\xff'...
. I want this to become [1, 5, 3, 255]
.
Starting from numpy 1.4, if one needs arrays of strings, it is recommended to use arrays of dtype object_ , string_ or unicode_ , and use the free functions in the numpy. char module for fast vectorized string operations.
The most straightforward way is to type cast the string into a list. Tyepcasting means to directly convert from one data type to another – in this case from the string data type to the list data type. You do this by using the built-in list() function and passing the given string as the argument to the function.
The numpy. char module provides a set of vectorized string operations for arrays of type numpy.
In Python 2, you can do this directly with numpy.fromstring
:
import numpy as np
s = '\x01\x05\x03\xff'
a = np.fromstring(s, dtype='uint8')
Once completing this, a
is array([ 1, 5, 3, 255])
and you can use the regular scipy/numpy FFT routines.
In Python 3, the switch to default Unicode strings means that you would read in the data as a bytestring and use the frombuffer
command instead:
import numpy as np
s = b'\x01\x05\x03\xff'
a = np.frombuffer(s, dtype='uint8')
to get the same results.
>>> '\x01\x05\x03\xff'
'\x01\x05\x03\xff'
>>> map(ord, '\x01\x05\x03\xff')
[1, 5, 3, 255]
>>> numpy.array(map(ord, '\x01\x05\x03\xff'))
array([ 1, 5, 3, 255])
Without knowing what you've got coming in it's tough, but if it were comma delimited integers you could do something like this:
myInts = map(int, myString.split(','))
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