Logo Questions Linux Laravel Mysql Ubuntu Git Menu
 

GFortran error: ld: library not found for -lSystem when trying to compile

I am getting a strange error when trying to compile a simple fortran-90 file using gfortran. I am working on a macOS mojave system. I have gfortran 8.2.0 installed and I checked to be sure of this by doing the following:

Input: gfortran --version
Output: GNU Fortran (GCC) 8.2.0
Copyright (C) 2018 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  
There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A 
PARTICULAR PURPOSE.

Which indicates that gfortran installed correctly and I also confirmed this by typing simply: gfortran, into the terminal, which returns:

gfortran: fatal error: no input files
compilation terminated.

However, when I try to compile my file like so:

gfortran hello.f90 -o hello.x

I get an error which reads:

ld: library not found for -lSystem
collect2: error: ld returned 1 exit status

I've tried compiling in different ways and I also tried setting the LD_LIBRARY_PATH in .bash_profile as described by https://gcc.gnu.org/wiki/GFortranBinaries32Linux but I still get the same error. The gfortran directory has the pathname: /usr/local/gfortran, however another gfortran which is not a directory can be found in /usr/local/bin

Typing:

which gfortran

Outputs:

/usr/local/bin/gfortran

And a long list search of this directory:

Input: ls -l /usr/local/bin/gfortran
Output: lrwxr-xr-x  1 root  wheel  32 15 May 14:07 
/usr/local/bin/gfortran -> /usr/local/gfortran/bin/gfortran

How can I fix this where everything seems to be correctly installed?

Any help would be greatly appreciated!

like image 349
datasplice Avatar asked May 15 '19 19:05

datasplice


2 Answers

On macOS Big Sur v11.1:

Relevant SO post: https://apple.stackexchange.com/questions/408999/gfortran-compiler-error-on-mac-os-big-sur

The fix is to add the stdlib to your $LIBRARY_PATH. For some reason or another it isn't in your standard $PATH anymore on 11.1.

export LIBRARY_PATH="$LIBRARY_PATH:/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/lib"

(or add it to login file and restart terminal).

like image 99
Jacob Faib Avatar answered Oct 03 '22 15:10

Jacob Faib


I'll also chime in (19 Dec 2020) that I just updated from MacOS Mojave to Catalina and suddenly got this error.

It resolved itself with

brew reinstall gcc
brew reinstall gfortran
like image 28
Brian Avatar answered Oct 03 '22 15:10

Brian