Does anyone know how to do an R data.table rolling join in PySpark?
Borrowing the example and nice explanation of rolling joins from Ben here;
sales<-data.table(saleID=c("S1","S2","S3","S4","S5"),
saleDate=as.Date(c("2014-2-20","2014-5-1","2014-6-15","2014-7- 1","2014-12-31")))
commercials<-data.table(commercialID=c("C1","C2","C3","C4"),
commercialDate=as.Date(c("2014-1-1","2014-4-1","2014-7-1","2014-9-15")))
setkey(sales,"saleDate")
setkey(commercials,"commercialDate")
sales[commercials, roll=TRUE]
Result being;
saleDate saleID commercialID
1: 2014-01-01 NA C1
2: 2014-04-01 S1 C2
3: 2014-07-01 S4 C3
4: 2014-09-15 S4 C4
Many thanks for the help.
join
+ fillna
First of all a rolling join is not the same as a join
and a fillna
! That would only be the case if the key of the table that is joined against (in terms of data.table that would be the left table and a right-join) has equivalents in the main table. A data.table rolling join does not require this.
There is no direct equivalent, as far as I know and I searched for quite a while. There is even an issue for it https://github.com/pandas-dev/pandas/issues/7546. However:
There is a solution though in pandas. Let's assume your right data.table is table A and your left data.table is table B.
tag
to A which are all 0 and a column tag
to B that are all 1.tag
from B (can be omitted, but it is clearer this way) and call the table B'. Keep B as an original - we are going to need it later.C = C.assign(groupNr = np.cumsum(C.tag))
query
) on tag
get rid of all B'-rows.groupNr
to the original B (integers from 0 to N-1 or from 1 to N, depending on whether you want forward or backward rolling join).groupNr
.#0. 'date' is the key for the rolling join. It does not have to be a date.
A = pd.DataFrame.from_dict(
{'date': pd.to_datetime(["2014-3-1", "2014-5-1", "2014-6-1", "2014-7-1", "2014-12-1"]),
'value': ["a1", "a2", "a3", "a4", "a5"]})
B = pd.DataFrame.from_dict(
{'date': pd.to_datetime(["2014-1-15", "2014-3-15", "2014-6-15", "2014-8-15", "2014-11-15", "2014-12-15"]),
'value': ["b1", "b2", "b3", "b4", "b5", "b6"]})
#1. Sort the table A and and B each by key.
A = A.sort_values('date')
B = B.sort_values('date')
#2. Add a column tag to A which are all 0 and a column tag to B that are all 1.
A['tag'] = 0
B['tag'] = 1
#3. Delete all columns except the key and tagfrom B (can be omitted, but it is clearer this way) and call the table B'. Keep B as an original - we are going to need it later.
B_ = B[['date','tag']] # You need two [], because you get a series otherwise.
#4. Concatenate A with B' to C and ignore the fact that the rows from B' has many NAs.
C = pd.concat([A, B_])
#5. Sort C by key.
C = C.sort_values('date')
#6. Make a new cumsum column with C = C.assign(groupNr = np.cumsum(C.tag))
C = C.assign(groupNr = np.cumsum(C.tag))
#7. Using filtering (query) on tag get rid of all B'-rows.
C = C[C.tag == 0]
#8. Add a running counter column groupNr to the original B (integers from 0 to N-1 or from 1 to N, depending on whether you want forward or backward rolling join).
B['groupNr'] = range(len(B)+1)[1:] # B's values are carried forward to A's values
B['groupNr'] = range(len(B)) # B's values are carried backward to A's values
#9. Join B with C on groupNr to D.
D = C.set_index('groupNr').join(B.set_index('groupNr'), lsuffix='_A', rsuffix='_B')
I also had a similar problem, solved with pandas.merge_asof.
Here is a quick solution for the exposed case:
sales = pd.DataFrame.from_dict(
{'saleDate': pd.to_datetime(["2014-02-20","2014-05-01","2014-06-15","2014-07-01","2014-12-31"]),
'saleID': ["S1","S2","S3","S4","S5"]})
commercials = pd.DataFrame.from_dict(
{'commercialDate': pd.to_datetime(["2014-01-01","2014-04-01","2014-07-01","2014-09-15"]),
'commercialID': ["C1","C2","C3","C4"]}
result = pd.merge_asof(commercials,
sales,
left_on='commercialDate',
right_on='saleDate')
# Ordering for easier comparison
result = result[['commercialDate','saleID','commercialID' ]]
The result is the same as expected:
commercialDate saleID commercialID
0 2014-01-01 NaN C1
1 2014-04-01 S1 C2
2 2014-07-01 S4 C3
3 2014-09-15 S4 C4
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