This issue may be relevant for other Duplicati users:
Duplicati is configured to backup via SSH on a Debian webserver. After this webserver was updated, the backup failed with the error message "Algorithm negotiation fail".
SFTP via FileZilla is still possible, using the same credentials.
The problem is that "insecure" algorithms were disabled for SSH (in 2014/15): https://stackoverflow.com/a/26607212/336311
One possible solution may be to re-enable these algorithms (see link above). But if you cannot (or do not want to) mess around with the SSH configuration, there is a more simple solution:
It took me an hour to track this issue, so I created this "share your knowledge" question on Stack Overflow. Hope it helps someone.
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