I'm a huge fan of tryCatch()
. However, until today I never really paid attention to the distinction between simple and regular warnings/errors and thus I don't really know how to handle them.
What I'd like to know is how to tell tryCatch
(see help file) that simple warnings are OK and that it should return the result of expr
instead of jumping to the warning
section.
Below you'll find a reproducible example
tryCatch
>> no warningrequire("forecast")
y <- ts(c(6178, 7084, 8162, 8462, 9644, 10466, 10748, 9963, 8194, 6848, 7027, 7269, 6775, 7819, 8371, 9069, 10248, 11030, 10882, 10333, 9109, 7685, 7602, 8350, 7829, 8829, 9948, 10638, 11253, 11424, 11391, 10665, 9396, 7775, 7933, 8186, 7444, 8484, 9864, 10252, 12282, 11637, 11577, 12417, 9637, 8094, 9280, 8334, 7899, 9994, 10078, 10801, 12950, 12222, 12246, 13281, 10366, 8730, 9614, 8639, 8772, 10894, 10455, 11179, 10588, 10794, 12770, 13812, 10857, 9290, 10925, 9491, 8919, 11607, 8852, 12537, 14759, 13667, 13731, 15110, 12185, 10645, 12161, 10840, 10436, 13589, 13402, 13103, 14933, 14147, 14057, 16234, 12389, 11595, 12772))
out <- forecast::auto.arima(x=y)
> out
Series: y
ARIMA(4,1,1)
Coefficients:
ar1 ar2 ar3 ar4 ma1
0.6768 -0.2142 0.5025 -0.7125 -0.8277
s.e. 0.0749 0.0889 0.0874 0.0735 0.0485
sigma^2 estimated as 915556: log likelihood=-780.33
AIC=1572.65 AICc=1573.62 BIC=1587.91
tryCatch
>> simple warningWhen I wrap it with tryCatch
, it detects a simple warning that will cause my expr
block to be "skipped" in favor of the warning
section. Thus the function does not return the estimation result, but the simple warning.
mod <- tryCatch(
out <- forecast::auto.arima(x=y),
error=function(e) {
print(e)
},
warning=function(w) {
print(w)
}
)
> mod
<simpleWarning in kpss.test(x): p-value smaller than printed p-value>
if (any(class(mod) == "simpleWarning")) {
mod <- forecast::auto.arima(x=y)
}
> mod
Series: y
ARIMA(4,1,1)
Coefficients:
ar1 ar2 ar3 ar4 ma1
0.6768 -0.2142 0.5025 -0.7125 -0.8277
s.e. 0.0749 0.0889 0.0874 0.0735 0.0485
sigma^2 estimated as 915556: log likelihood=-780.33
AIC=1572.65 AICc=1573.62 BIC=1587.91
I think you're looking for the difference between tryCatch
, which catches a condition and continues evaluation from the environment where the tryCatch was defined, versus withCallingHandlers
, which allows you to 'handle' a condition and then continue on from the location where the condition occurred. Take a look at warning
(or the help page for warning, but that's less fun), especially the lines
withRestarts({
.Internal(.signalCondition(cond, message, call))
.Internal(.dfltWarn(message, call))
}, muffleWarning = function() NULL)
This says -- signal a condtion, but insert a 'restart' where the condition was signaled from. Then you'd
withCallingHandlers({
warning("curves ahead")
2
}, warning = function(w) {
## what are you going to do with the warning?
message("warning occurred: ", conditionMessage(w))
invokeRestart("muffleWarning")
})
Although withCallingHandlers
is often used with warnings and tryCatch
with errors, there is nothing to stop one from 'handling' an error or catching a warning if that is the appropriate action.
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