I'm quite stunned to find out that show is an S4 generic, and that I can't find a way to use the S3 dispatching to get a show function to work. A simple demonstration:
> x <- 1:5
> xx <- structure(x,class="aClass")
> show.aClass <- function(object){
+ cat("S3 dispatching.\n")
+ print(object)
+ }
> xx
[1] 1 2 3 4 5
No S3 dispatching here...
> setMethod("show","aClass",function(object){
+ cat("S4 dispatching.\n")
+ print(object)
+ })
in method for ‘show’ with signature ‘"aClass"’: no definition for class “aClass”
[1] "show"
> xx
[1] 1 2 3 4 5
What did you think?
> print.aClass <- function(object){
+ cat("the print way...\n")
+ print(as.vector(object)) #drop class to avoid infinite loop!
+ }
> xx
the print way...
[1] 1 2 3 4 5
And for print it works.
I have pretty good reasons to stay with S3 (of which a big part is the minimization of overhead, as the objects will be used extensively in bootstrapping). How am I supposed to define a different show and print method here?
Maybe
setOldClass("aClass")
setMethod(show, "aClass", function(object) cat("S4\n"))
print.aClass <- function(object) { cat("S3... "); show(object) }
and then
> structure(1:5, class="aClass")
S3... S4
But I'm not really understanding what you want to do.
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