Creating a Confidence Ellipses in a sccatterplot using matplotlib

Question

How to creating a Confidence Ellipses in a sccatterplot using matplotlib?

The following code works until creating scatter plot. Then, does anyone familiar with putting Confidence Ellipses over the scatter plot?

import numpy as np import matplotlib.pyplot as plt x = [5,7,11,15,16,17,18] y = [8, 5, 8, 9, 17, 18, 25]  plt.scatter(x,y) plt.show() 

Following is the reference for Confidence Ellipses from SAS.

http://support.sas.com/documentation/cdl/en/grstatproc/62603/HTML/default/viewer.htm#a003160800.htm

The code in sas is like this:

proc sgscatter data=sashelp.iris(where=(species="Versicolor"));   title "Versicolor Length and Width";   compare y=(sepalwidth petalwidth)           x=(sepallength petallength)           / reg ellipse=(type=mean) spacing=4; run; 

Answer 1

The following code draws a one, two, and three standard deviation sized ellipses:

x = [5,7,11,15,16,17,18] y = [8, 5, 8, 9, 17, 18, 25] cov = np.cov(x, y) lambda_, v = np.linalg.eig(cov) lambda_ = np.sqrt(lambda_) from matplotlib.patches import Ellipse import matplotlib.pyplot as plt ax = plt.subplot(111, aspect='equal') for j in xrange(1, 4):     ell = Ellipse(xy=(np.mean(x), np.mean(y)),                   width=lambda_[0]*j*2, height=lambda_[1]*j*2,                   angle=np.rad2deg(np.arccos(v[0, 0])))     ell.set_facecolor('none')     ax.add_artist(ell) plt.scatter(x, y) plt.show()