I'm trying to create a virtual environment using conda
on Google Colaboratory.
However, I can't activate with the following error.
CommandNotFoundError: Your shell has not been properly configured to use 'conda activate'.
To initialize your shell, run
$ conda init <SHELL_NAME>
Currently supported shells are:
- bash
- fish
- tcsh
- xonsh
- zsh
- powershell
See 'conda init --help' for more information and options.
IMPORTANT: You may need to close and restart your shell after running 'conda init
Three things that I've tried:
One is to add the following code to ~/.bashrc
# >>> conda init >>>
__conda_setup="$(CONDA_REPORT_ERRORS=false '$HOME/anaconda3/bin/conda' shell.bash hook 2> /dev/null)"
if [ $? -eq 0 ]; then
\eval "$__conda_setup"
else
if [ -f "$HOME/anaconda3/etc/profile.d/conda.sh" ]; then
. "$HOME/anaconda3/etc/profile.d/conda.sh"
CONDA_CHANGEPS1=false conda activate base
else
\export PATH="$PATH:$HOME/anaconda3/bin"
fi
fi
unset __conda_setup
# <<< conda init <<<
# ~~~~~~~~~~~~
conda create --name XXXXXX python=3.6 -y
conda activate XXXXXX
# ~~~~~~~~~~~~
Secondly, I added the following code to ~/.bashrc
export PATH="$PYENV_ROOT/versions/anaconda3-2.5.0/bin/:$PATH"
Thirdly, I added the following code to ~/.bashrc
. /opt/anaconda3/etc/profile.d/conda.sh
conda activate base
If I try to activate each of them, I get the same error. If anyone knows how to fix it, please share your wisdom.
Thanks
To activate your Conda environment, type source activate <yourenvironmentname> . Note that conda activate will not work on Discovery with this version. To install a specific package, type conda install -n <yourenvironmentname> [package] . To deactivate the current, active Conda environment, type conda deactivate .
for anaconda 4 : bashrc and then copy the path into the file and save it after that you activate the changes using source . bashrc. When I type export PATH=~/anaconda3/bin:$PATH into the terminal and then run conda --version it works fine.
you can simply add the anaconda bin folder (eg.: ~/anaconda3/bin ) to the system PATH and then source activate ENV_NAME in your ~/. bashrc or ~/.
The answer is here: https://github.com/conda/conda/issues/7980
source ~/anaconda3/etc/profile.d/conda.sh
conda activate my_env
Maybe you're also using the wrong anaconda/miniconda path. Use the one which results from this command:
conda info | grep -i 'base environment'
:)
For me the last answer here worked. It's kind of inconvenient but better than nothing... So, if it's necessary to run something in the conda environment, I just put !source <path_to_activate_function> my_env
before other commands, as follows:
!source ~/anaconda3/bin/activate vilbert-mt && conda env list
First you have to run
conda init <your terminal type>
eg:
conda init bash
you will get something like
no change /home/t/anaconda3/condabin/conda
no change /home/t/anaconda3/bin/conda
no change /home/t/anaconda3/bin/conda-env
no change /home/t/anaconda3/bin/activate
no change /home/t/anaconda3/bin/deactivate
no change /home/t/anaconda3/etc/profile.d/conda.sh
no change /home/t/anaconda3/etc/fish/conf.d/conda.fish
no change /home/t/anaconda3/shell/condabin/Conda.psm1
no change /home/t/anaconda3/shell/condabin/conda-hook.ps1
no change /home/t/anaconda3/lib/python3.9/site-packages/xontrib/conda.xsh
no change /home/t/anaconda3/etc/profile.d/conda.csh
no change /home/t/.bashrc
then close the current terminal window and open it again (reopen basically).
Now if you type conda activate
it should work
t@t:~$ conda activate
(base) t@t:~$ ^C
(base) t@t:~$
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