I want to add 99% and 95% confidence interval in XYplot.
The following is data:
X <- 1:20
Y <- c(0.5, 1.4, 2.3, 3.4, 4.5,
3.3, 3.0, 2.1, 1.5, 0,
0, 3.4, 4.5, 6.7, 5.3, 2.8,
0.5, 3.4, 3.5, 3.7)
mydata <- data.frame (X, Y)
I want to identify the maximum value of Y and corresponding X value is position of median in box and whisker plot. Whenever the value of Y declines by 1 point (either left or right) is the 99% confidence interval (will be inside the box) and whenever the Y declines to 2 (both left and right), the corresponding positions in x will be represented by the whisker.
Desired plot:
Explanation.
corresponding x value to max(Y) = 6.7 corresponding x value to box left = 6.7 - 1, box right = 6.7 - 1 corresponding x value to whisker left = 6.7 - 2, whisker right = 6.7 - 2
The following plot should get you started. It uses rectangles rather than a bwplot, and it also doesn't do interpolation.
Create the data:
library(ggplot2)
dat <- data.frame(
x = 1:20,
y = c(0.5, 1.4, 2.3, 3.4, 4.5, 3.3, 3.0, 2.1, 1.5, 0, 0, 3.4, 4.5, 6.7, 5.3, 2.8, 0.5, 3.4, 3.5, 3.7)
)
Write a function that returns the 5 desired points:
getRange <- function(x, a=1, b=2){
maxy <- max(x)
xMax <- which.max(x)
x2 <- max(which(x[1:xMax] <= (maxy-a)))
x1 <- max(which(x[1:x2] <= (maxy-b)))
x3 <- xMax + min(which(x[-(1:xMax)] < (maxy+a)))
x4 <- x3 + min(which(x[-(1:x3)] < (maxy+b)))
data.frame(x1=x1, x2=x2, max=xMax, x3=x3, x4=x4)
}
Get the range values and plot:
rr <- getRange(dat$y, 1, 3)
ggplot(dat, aes(x, y)) + geom_line() + geom_point() +
geom_rect(data=rr, aes(xmin=x2, xmax=x3, NULL, NULL),
ymin=-Inf, ymax=Inf, fill="blue", alpha=0.25) +
geom_rect(data=rr, aes(xmin=x1, xmax=x4, NULL, NULL),
ymin=-Inf, ymax=Inf, fill="blue", alpha=0.25)
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