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Why is G1 Full GC being triggered seeminly unnecessarily?

I am using

java version "1.7.0_09"
Java(TM) SE Runtime Environment (build 1.7.0_09-b05)
Java HotSpot(TM) 64-Bit Server VM (build 23.5-b02, mixed mode)

with G1 garbage collector. JVM argumens are

-server -Xss4096k -XX:MaxPermSize=512m -XX:PermSize=512m -Xms30G 
-Xmx30G -Xnoclassgc -XX:+UseNUMA -XX:+UseFastAccessorMethods 
-XX:ReservedCodeCacheSize=48m -XX:+UseStringCache 
-XX:+UseGCOverheadLimit -Duser.timezone=EET 
-Xmaxf1 -XX:+UseCompressedOops -XX:+DisableExplicitGC 
-XX:+AggressiveOpts -XX:CMSInitiatingOccupancyFraction=70 
-XX:+ParallelRefProcEnabled -XX:+UseAdaptiveSizePolicy 
-XX:MaxGCPauseMillis=500 -XX:+UseG1GC 
-XX:InitiatingHeapOccupancyPercent=0 
-XX:GCPauseIntervalMillis=10000 -XX:+PrintGCDetails 
-XX:+PrintHeapAtGC -XX:+PrintGCDateStamps -Xloggc:gc.log

However, I am experiencing following Full GC scans without any apparent reason, how to get rid of them?

GC log with some tail from preceding events:

{Heap before GC invocations=206 (full 8):
 garbage-first heap   total 31457280K, used 18323299K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 768 young (6291456K), 31 survivors (253952K)
 compacting perm gen  total 524288K, used 145771K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465af18, 0x00007fce7465b000, 0x00007fce8b800000)
No shared spaces configured.
2013-01-16T11:45:31.290+0200: 20430.451: [GC pause (young), 0.54738500 secs]
   [Parallel Time: 510.7 ms]
      [GC Worker Start (ms):  20430451.7  20430451.8  20430451.8  20430451.8
       Avg: 20430451.8, Min: 20430451.7, Max: 20430451.8, Diff:   0.1]
      [Ext Root Scanning (ms):  22.3  68.3  21.8  20.8
       Avg:  33.3, Min:  20.8, Max:  68.3, Diff:  47.5]
      [Update RS (ms):  21.6  0.0  23.6  23.7
       Avg:  17.3, Min:   0.0, Max:  23.7, Diff:  23.7]
         [Processed Buffers : 77 0 18 55
          Sum: 150, Avg: 37, Min: 0, Max: 77, Diff: 77]
      [Scan RS (ms):  19.6  0.1  19.3  19.6
       Avg:  14.7, Min:   0.1, Max:  19.6, Diff:  19.5]
      [Object Copy (ms):  439.1  434.2  437.8  438.4
       Avg: 437.4, Min: 434.2, Max: 439.1, Diff:   4.9]
      [Termination (ms):  0.0  0.0  0.0  0.0
       Avg:   0.0, Min:   0.0, Max:   0.0, Diff:   0.0]
         [Termination Attempts : 1 1 1 1
          Sum: 4, Avg: 1, Min: 1, Max: 1, Diff: 0]
      [GC Worker End (ms):  20430954.5  20430954.6  20430954.5  20430954.4
       Avg: 20430954.5, Min: 20430954.4, Max: 20430954.6, Diff:   0.1]
      [GC Worker (ms):  502.7  502.8  502.7  502.6
       Avg: 502.7, Min: 502.6, Max: 502.8, Diff:   0.2]
      [GC Worker Other (ms):  8.0  8.0  8.0  8.1
       Avg:   8.0, Min:   8.0, Max:   8.1, Diff:   0.1]
   [Clear CT:   2.6 ms]
   [Other:  34.1 ms]
      [Choose CSet:   0.1 ms]
      [Ref Proc:  27.4 ms]
      [Ref Enq:   0.2 ms]
      [Free CSet:   5.4 ms]
   [Eden: 5896M(5896M)->0B(5688M) Survivors: 248M->456M Heap: 17893M(30720M)->12208M(30720M)]
 [Times: user=2.12 sys=0.02, real=0.55 secs]
Heap after GC invocations=207 (full 8):
 garbage-first heap   total 31457280K, used 12501684K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 57 young (466944K), 57 survivors (466944K)
 compacting perm gen  total 524288K, used 145771K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465af18, 0x00007fce7465b000, 0x00007fce8b800000)
No shared spaces configured.
}
{Heap before GC invocations=207 (full 8):
 garbage-first heap   total 31457280K, used 19058524K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 727 young (5955584K), 57 survivors (466944K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
2013-01-16T11:46:26.619+0200: 20485.781: [GC pause (mixed), 1.42356500 secs]
   [Parallel Time: 1385.9 ms]
      [GC Worker Start (ms):  20485786.6  20485786.6  20485786.6  20485786.7
       Avg: 20485786.6, Min: 20485786.6, Max: 20485786.7, Diff:   0.1]
      [Ext Root Scanning (ms):  22.1  70.0  22.2  21.3
       Avg:  33.9, Min:  21.3, Max:  70.0, Diff:  48.7]
      [Update RS (ms):  9.9  0.0  10.9  11.2
       Avg:   8.0, Min:   0.0, Max:  11.2, Diff:  11.2]
         [Processed Buffers : 13 0 25 17
          Sum: 55, Avg: 13, Min: 0, Max: 25, Diff: 25]
      [Scan RS (ms):  324.6  276.4  324.6  324.6
       Avg: 312.5, Min: 276.4, Max: 324.6, Diff:  48.2]
      [Object Copy (ms):  1021.1  1031.2  1019.8  1020.5
       Avg: 1023.1, Min: 1019.8, Max: 1031.2, Diff:  11.4]
      [Termination (ms):  0.0  0.0  0.0  0.0
       Avg:   0.0, Min:   0.0, Max:   0.0, Diff:   0.0]
         [Termination Attempts : 6 5 5 1
          Sum: 17, Avg: 4, Min: 1, Max: 6, Diff: 5]
      [GC Worker End (ms):  20487164.3  20487164.3  20487164.3  20487164.3
       Avg: 20487164.3, Min: 20487164.3, Max: 20487164.3, Diff:   0.0]
      [GC Worker (ms):  1377.7  1377.6  1377.6  1377.6
       Avg: 1377.7, Min: 1377.6, Max: 1377.7, Diff:   0.1]
      [GC Worker Other (ms):  8.2  8.3  8.3  8.3
       Avg:   8.3, Min:   8.2, Max:   8.3, Diff:   0.1]
   [Clear CT:   4.4 ms]
   [Other:  33.3 ms]
      [Choose CSet:   5.5 ms]
      [Ref Proc:   5.0 ms]
      [Ref Enq:   0.2 ms]
      [Free CSet:   9.1 ms]
   [Eden: 5360M(5688M)->0B(5784M) Survivors: 456M->360M Heap: 18616M(30720M)->11359M(30720M)]
 [Times: user=5.56 sys=0.01, real=1.42 secs]
Heap after GC invocations=208 (full 8):
 garbage-first heap   total 31457280K, used 11632594K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 45 young (368640K), 45 survivors (368640K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
}
{Heap before GC invocations=208 (full 8):
 garbage-first heap   total 31457280K, used 11632594K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 45 young (368640K), 45 survivors (368640K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
2013-01-16T11:46:28.060+0200: 20487.222: [Full GC 11359M->8807M(30720M), 32.4879420 secs]
 [Times: user=45.41 sys=0.21, real=32.48 secs]
Heap after GC invocations=209 (full 9):
 garbage-first heap   total 31457280K, used 9019206K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
}

Other similar ones:

{Heap before GC invocations=105 (full 4):
 garbage-first heap   total 31457280K, used 12638024K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 56 young (458752K), 56 survivors (458752K)
 compacting perm gen  total 524288K, used 147352K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  28% used [0x00007fd2a2800000, 0x00007fd2ab7e61f8, 0x00007fd2ab7e6200, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T10:31:31.240+0200: 14185.812: [Full GC 12341M->7092M(30720M), 25.3417840 secs]
 [Times: user=35.12 sys=0.21, real=25.33 secs]
Heap after GC invocations=106 (full 5):
 garbage-first heap   total 31457280K, used 7262578K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 147352K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  28% used [0x00007fd2a2800000, 0x00007fd2ab7e61f8, 0x00007fd2ab7e6200, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=248 (full 11):
 garbage-first heap   total 31457280K, used 12262418K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 37 young (303104K), 37 survivors (303104K)
 compacting perm gen  total 524288K, used 152608K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abd082e8, 0x00007fd2abd08400, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T13:01:39.869+0200: 23194.441: [Full GC 11975M->7331M(30720M), 28.6147390 secs]
 [Times: user=40.31 sys=0.03, real=28.62 secs]
Heap after GC invocations=249 (full 12):
 garbage-first heap   total 31457280K, used 7507920K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 152608K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abd082e8, 0x00007fd2abd08400, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=399 (full 19):
 garbage-first heap   total 31457280K, used 13016093K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 54 young (442368K), 54 survivors (442368K)
 compacting perm gen  total 524288K, used 155475K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abfd4c70, 0x00007fd2abfd4e00, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T15:31:36.484+0200: 32191.056: [Full GC 12711M->7543M(30720M), 29.5013210 secs]
 [Times: user=41.39 sys=0.06, real=29.50 secs]
Heap after GC invocations=400 (full 20):
 garbage-first heap   total 31457280K, used 7724994K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 155475K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abfd4c70, 0x00007fd2abfd4e00, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=476 (full 26):
 garbage-first heap   total 31457280K, used 14622246K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 27 young (221184K), 27 survivors (221184K)
 compacting perm gen  total 524288K, used 156716K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac10b2b0, 0x00007fd2ac10b400, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T18:46:41.545+0200: 43896.117: [Full GC 14279M->8107M(30720M), 31.6936770 secs]
 [Times: user=44.40 sys=0.18, real=31.69 secs]
Heap after GC invocations=477 (full 27):
 garbage-first heap   total 31457280K, used 8302054K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 156551K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac0e1fa0, 0x00007fd2ac0e2000, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=522 (full 34):
 garbage-first heap   total 31457280K, used 16096219K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 30 young (245760K), 30 survivors (245760K)
 compacting perm gen  total 524288K, used 156869K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac1315d8, 0x00007fd2ac131600, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T22:31:40.711+0200: 57395.283: [Full GC 15718M->11933M(30720M), 42.0857250 secs]
 [Times: user=60.13 sys=0.07, real=42.08 secs]
Heap after GC invocations=523 (full 35):
 garbage-first heap   total 31457280K, used 12219927K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 156869K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac1315d8, 0x00007fd2ac131600, 0x00007fd2c2800000)
No shared spaces configured.
}

Other similar issue reports:

http://grokbase.com/t/openjdk/hotspot-gc-use/1192sy84j5/g1c-strange-full-gc-behavior http://grokbase.com/p/openjdk/hotspot-gc-use/123ydf9c92/puzzling-why-is-a-full-gc-triggered-here http://mail.openjdk.java.net/pipermail/hotspot-gc-use/2013-February/001484.html

I have been analyzing the issue using appdynamics profiler and I have found out that every time Full GC occurs, Code Cache (configured to its maximum) is full. It seems like a bug in GC.

See also the profiler image, two unnecessary Full GC:s in middle between 24/5 and 25/5. More importantly, they kill the server usability, because they last 60 seconds each:

Profiler log image http://eisler.vps.kotisivut.com/logs/g1gc-code-cache-full-gc-bug-illustration.png

See also discussion about Azul's pauseless GC, they seem to have worked out this kind of issues http://www.artima.com/lejava/articles/azul_pauseless_gc.html

like image 854
Martin Avatar asked Jan 15 '13 02:01

Martin


People also ask

What triggers full GC?

The reason that a Full GC occurs is because the application allocates too many objects that can't be reclaimed quickly enough. Often concurrent marking has not been able to complete in time to start a space-reclamation phase.

When GC occurs in old gen area it is known as full GC?

A Full GC will be triggered whenever the heap fills up. In such a case the young generation is collected first followed by the old generation.

Is G1 GC stop the world?

After space-reclamation, the collection cycle restarts with another young-only phase. As backup, if the application runs out of memory while gathering liveness information, G1 performs an in-place stop-the-world full heap compaction (Full GC) like other collectors.

Is G1 evacuation pause stop the world?

In G1, a Full GC is a single threaded Stop The World (STW) pause which will evacuate and compact all regions. There are three important pieces of information you can get from the Full GC logs. Moving on to the advanced flags, these options provide valuable insights into the values and thresholds.


2 Answers

please see my reply in G1GC long pause with initial-mark

your every setting should has a solid reason to be here...and unfortunately some of them don't have e.g. -XX:+UseBiasedLocking (used for combination of tenured and young generation GCs, but G1GC is capable to handle both) -XX:+DisableExplicitGC (its unpredictable, in my experience its never restrict explicit gc calls)

please use/tweak accordingly below mentioned settings to get optimum results, I'm giving you baseline to move forward, hope so these settings will work for you: Java G1 garbage collection in production

like image 186
emkays Avatar answered Oct 15 '22 21:10

emkays


We recorded this bug on 1.7._u06 and upgraded to 1.7.0_21-b11 just a couple of days ago and we haven't seen any Full GC's since upgrade, so it seems like this bug was fixed in JVM. The code cache memory profiles look much nicer now too in the profiler. In the past, this problem used to be a daily one, one to more times per day.

If the situation changes, I will report back. Until then, I consider this problem solved with the upgrade.

like image 36
Martin Avatar answered Oct 15 '22 19:10

Martin