Biomedical informatician.

Recently contributed to a RDF semantic model of an Electronic Health Record, using R, SPARQL, GraphDB, OWL, Python and Scala.

Also providing analyses in metagenomics, gene expression, pathway analysis and related areas to various academic and commercial groups

Preferred tools: RStudio, Jupyter or similar Notebooks, SQL, SPARQL, SVG, Markdown, GitHub, AWS and Mac OS or Linux (esp. Ubuntu or CentOS.)

Personal interests: mountain biking, spicy vegetarian food, mindfulness meditation