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DavidArndt
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About
Bioinformatician at The Metabolomics Innovation Centre (TMIC).
Contributed to apps including PHASTER, Heatmapper, CFM-ID, and METAGENassist
Contributed to the widely used Human Metabolome Database, the FooDB database, the Toxic Exposome Database, and others
11+ years experience in bioinformatics and web app/software development
Diverse bioinformatics experience in metabolomics, cheminformatics, metagenomics, and structural biology
>20 peer-reviewed publications in bioinformatics
Programming languages: Ruby, R, Python, Perl, C, Bash, Java, Fortran, PHP
Web app development: Ruby on Rails, Shiny, CGI, JSP
MySQL/MariaDB database development
Container technologies (Docker, Singularity), virtual machines (VirtualBox, Vagrant)
>5 years as primary manager of IT infrastructure in a bioinformatics lab
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docker build error Gem::Ext::BuildError: ERROR: Failed to build gem native extension for mimemagic-0.3.9