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Stackplot using list of dictionary values (Python 3.x)

I am trying to make a stackplot from a dictionary where the value is a list of floats between 0 and 1 and the index of the value in the list is the time (t1, t2, ...tn) of measurement. All keys have the same number of values. For example:

a = {1:[0.3,0.5,0.7], 2:[0.4,0.6,0.8], 5:[0.1,0.15,0.20]}

so that at t2: a[1] = 0.5, a[2] = 0.6, and a[5] = 0.15, and so on at the other indices of the list of values.

I'm going for a stackplot like the one here with the indices of the value list on the x-axis and the value of a[i] at that index on the y-axis , but can't figure out how to adapt that code or the matplotlib example to a dictionary.

Python version: 3.4

Error (for both my data and toy data set): TypeError: ufunc 'isfinite' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe''

Suggestions?

like image 285
bradi Avatar asked Dec 11 '25 19:12

bradi


1 Answers

UPDATE - The error you are getting is because matplotlib is somehow not happy with the view you are getting from dict.values(). Note that this is only a problem of python 3.x as for python 2.x dict.values() returns a list. You can simply avoid this problem by converting the view into a normal list, so list(dict.values()).

Here is the matplotlib example using a dict, working for both python 2.x and 3.x:

import numpy as np
from matplotlib import pyplot as plt

fnx = lambda : np.random.randint(5, 50, 10).astype(np.float64)
d = {i: v for i, v in enumerate(np.row_stack((fnx(), fnx(), fnx())))}
# d looks basically like your a
x = range(len(d[0]))
y = list(d.values()) # d.values() returns a view in python 3.x
fig, ax = plt.subplots()
ax.stackplot(x, y)
plt.show()
like image 147
jojo Avatar answered Dec 14 '25 08:12

jojo