I want to create a plot for three different factors where all violins have the same area. But using facet_grid(. ~ C)
seems to force the violins within each facet (i.e. just those within a level of factor C) to have the same area. How can I overcome this?
library(ggplot2)
d <- data.frame(value = c(906, 1013, 1109, 876, 747, 759, 876, 1358, 739,
1086, 807, 954, 1586, 762, 1353, 1221, 976, 1002,
1129, 943, 1270, 1126, 853, 950, 677, 696, 681,
615, 736, 595, 590, 618, 524, 1014, 515, 645, 860,
874, 934, 728, 1078, 659, 1024, 786, 821, 541,
681, 744),
A = gl(2, 12, 48),
B = gl(2, 6, 48),
C = gl(2, 24))
ggplot(d, aes(x = A, y = value, fill = B)) +
geom_violin(trim = FALSE, scale = "area") +
facet_grid(. ~ C)
First we will create a new data.frame
with precalculated densities:
library('tidyverse')
d2 <- d %>%
group_by(A, B, C) %>%
do({
dens <- density(.$value)
tibble(x = c(head(dens$x, 1), dens$x, tail(dens$x, 1)), #Add 0s at end to close lines
y = c(0, dens$y, 0))
}) %>%
ungroup() %>%
mutate(ymin = as.numeric(A:B) - .4*y/max(y), # Add offset for factor levels
ymax = as.numeric(A:B) + .4*y/max(y))
And now we will plot the densities as ribbons:
ggplot(d2)+
aes(x = x,
ymin = ymin,
ymax = ymax,
group = A:B,
fill = B)+
geom_ribbon()+
# Enclosing lines
geom_line(aes(y = ymin))+
geom_line(aes(y = ymax))+
facet_grid(. ~ C)+
scale_y_continuous(breaks = c(1.5, 2.5),
minor_breaks = c(1.5, 3.5),
labels = levels(d2$A))+
labs(x = 'value', y = 'A')+
coord_flip()
Both of the below give the same plot as the faceted one:
ggplot(d, aes(x = paste(C,A), y = value, fill = B)) +
geom_violin(trim = FALSE, scale = "area")
ggplot(d, aes(x = C:A, y = value, fill = B)) +
geom_violin(trim = FALSE, scale = "area")
It will be good if you can describe the purpose of your plot. As other approaches might serve your purpose better like back to back densities or ggridges::geom_density_ridges2:
ggplot(d,
aes(x = value, y = paste(A,B), fill = B, height = ..density..))+
ggridges::geom_density_ridges2(scale = 1.2,alpha=0.2,stat = "density")+
facet_grid(. ~ C)+
ggridges::theme_ridges()+
coord_flip()
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