I'm trying to scrape an irregular table from Wikipedia using rvest. The table has cells that span multiple rows. The documentation for html_table
clearly states that this is a limitation. I'm just wondering if there's a workaround.
The table looks like this:
My code:
library(rvest)
url <- "https://en.wikipedia.org/wiki/Arizona_League"
parks <- url %>%
read_html() %>%
html_nodes(xpath='/html/body/div[3]/div[3]/div[4]/div/table[2]') %>%
html_table(fill=TRUE) %>% # fill=FALSE yields the same results
.[[1]]
Returns this:
Where there are several errors, for example: row 4 under "City" should be "Mesa", NOT "Chicago Cubs". I'd be happy with blank cells as I could "fill down" as needed, but the wrong data is a problem. Help is much appreciated.
I have a way to code it. It is not perfect, a bit long but it does the trick:
library(rvest)
url <- "https://en.wikipedia.org/wiki/Arizona_League"
# get the lines of the table
lines <- url %>%
read_html() %>%
html_nodes(xpath="//table[starts-with(@class, 'wikitable')]") %>%
html_nodes(xpath = 'tbody/tr')
#define the empty table
ncol <- lines %>%
.[[1]] %>%
html_children()%>%
length()
nrow <- length(lines)
table <- as.data.frame(matrix(nrow = nrow,ncol = ncol))
# fill the table
for(i in 1:nrow){
# get content of the line
linecontent <- lines[[i]]%>%
html_children()%>%
html_text()%>%
gsub("\n","",.)
# attribute the content to free columns
colselect <- is.na(table[i,])
table[i,colselect] <- linecontent
# get the line repetition of each columns
repetition <- lines[[i]]%>%
html_children()%>%
html_attr("rowspan")%>%
ifelse(is.na(.),1,.) %>% # if no rowspan, then it is a normal row, not a multiple one
as.numeric
# repeat the cells of the multiple rows down
for(j in 1:length(repetition)){
span <- repetition[j]
if(span > 1){
table[(i+1):(i+span-1),colselect][,j] <- rep(linecontent[j],span-1)
}
}
}
The idea is to have the html lines of the table in the lines
variable by getting the /tr
nodes. I then create an empty table: number of columns is the length of the children of the first row (because it contains the titles), number of line the length of lines
. I fill it by hand in a for loop (didn't amanger a nicer way here).
The difficulty is that the amount of column text given in a row changes when there is already a multiple row column spanning on the current row. For example :
lines[[3]]%>%
html_children()%>%
html_text()%>%
gsub("\n","",.)
gives only 5 values :
[1] "Arizona League Athletics Gold" "Oakland Athletics" "Mesa" "Fitch Park"
[5] "10,000"
instead of the 6 columns, because the first column is East
on 8 rows. This East
value appears only on the first rows it spans on.
The trick is to repeat the cells down in the table when they have a rowspan
attribute (meaning they span on several rows). It allows to select on the next row only the NA columns, so that the amount of text given by the html line match the amount of free columns in the table we fill.
This is done with the colselect
variable, which is a bolean giving the free rows before repeting the cells of the given row.
The result :
V1 V2 V3 V4 V5 V6
1 Division Team MLB Affiliation City Stadium Capacity
2 East Arizona League Angels Los Angeles Angels Tempe Tempe Diablo Stadium 9,785
3 East Arizona League Athletics Gold Oakland Athletics Mesa Fitch Park 10,000
4 East Arizona League Athletics Green Oakland Athletics Mesa Fitch Park 10,000
5 East Arizona League Cubs 1 Chicago Cubs Mesa Sloan Park 15,000
6 East Arizona League Cubs 2 Chicago Cubs Mesa Sloan Park 15,000
7 East Arizona League Diamondbacks Arizona Diamondbacks Scottsdale Salt River Fields at Talking Stick 11,000
8 East Arizona League Giants Black San Francisco Giants Scottsdale Scottsdale Stadium 12,000
9 East Arizona League Giants Orange San Francisco Giants Scottsdale Scottsdale Stadium 12,000
10 Central Arizona League Brewers Gold Milwaukee Brewers Phoenix American Family Fields of Phoenix 8,000
11 Central Arizona League Dodgers Lasorda Los Angeles Dodgers Phoenix Camelback Ranch 12,000
12 Central Arizona League Indians Blue Cleveland Indians Goodyear Goodyear Ballpark 10,000
13 Central Arizona League Padres 2 San Diego Padres Peoria Peoria Sports Complex 12,882
14 Central Arizona League Reds Cincinnati Reds Goodyear Goodyear Ballpark 10,000
15 Central Arizona League White Sox Chicago White Sox Phoenix Camelback Ranch 12,000
16 West Arizona League Brewers Blue Milwaukee Brewers Phoenix American Family Fields of Phoenix 8,000
17 West Arizona League Dodgers Mota Los Angeles Dodgers Phoenix Camelback Ranch 12,000
18 West Arizona League Indians Red Cleveland Indians Goodyear Goodyear Ballpark 10,000
19 West Arizona League Mariners Seattle Mariners Peoria Peoria Sports Complex 12,882
20 West Arizona League Padres 1 San Diego Padres Peoria Peoria Sports Complex 12,882
21 West Arizona League Rangers Texas Rangers Surprise Surprise Stadium 10,500
22 West Arizona League Royals Kansas City Royals Surprise Surprise Stadium 10,500
I made a shorter version of the function, with more explanation here
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