Logo Questions Linux Laravel Mysql Ubuntu Git Menu
 

Redshift COPY operation doesn't work in SQLAlchemy

I'm trying to do a Redshift COPY in SQLAlchemy.

The following SQL correctly copies objects from my S3 bucket into my Redshift table when I execute it in psql:

COPY posts FROM 's3://mybucket/the/key/prefix' 
WITH CREDENTIALS 'aws_access_key_id=myaccesskey;aws_secret_access_key=mysecretaccesskey' 
JSON AS 'auto';

I have several files named

s3://mybucket/the/key/prefix.001.json
s3://mybucket/the/key/prefix.002.json   
etc.

I can verify that the new rows were added to the table with select count(*) from posts.

However, when I execute the exact same SQL expression in SQLAlchemy, execute completes without error, but no rows get added to my table.

session = get_redshift_session()
session.bind.execute("COPY posts FROM 's3://mybucket/the/key/prefix' WITH CREDENTIALS aws_access_key_id=myaccesskey;aws_secret_access_key=mysecretaccesskey'    JSON AS 'auto';")
session.commit()

It doesn't matter whether I do the above or

from sqlalchemy.sql import text 
session = get_redshift_session()
session.execute(text("COPY posts FROM 's3://mybucket/the/key/prefix' WITH CREDENTIALS aws_access_key_id=myaccesskey;aws_secret_access_key=mysecretaccesskey'    JSON AS 'auto';"))
session.commit()
like image 789
Aneil Mallavarapu Avatar asked Feb 02 '15 04:02

Aneil Mallavarapu


People also ask

Does SQLAlchemy work with redshift?

The new Amazon Redshift SQLAlchemy dialect uses the Amazon Redshift Python driver ( redshift_connector ) and lets you securely connect to your Amazon Redshift database. It natively supports IAM authentication and single sign-on (SSO).

Where is redshift Copy command?

The COPY command is an extension of SQL supported by Redshift. Therefore, the COPY command needs to be issued from an SQL client. You mention that you have configured SQL Workbench. Once you connect to the Redshift cluster, run the command from within that connection.

What is redshift Copy command?

The COPY command appends the new input data to any existing rows in the table. The maximum size of a single input row from any source is 4 MB. To use the COPY command, you must have INSERT privilege for the Amazon Redshift table.


2 Answers

Add a commit to the end of the copy worked for me:

<your copy sql>;commit;
like image 91
David Stafford Avatar answered Nov 12 '22 16:11

David Stafford


I basically had the same problem, though in my case it was more:

engine = create_engine('...')
engine.execute(text("COPY posts FROM 's3://mybucket/the/key/prefix' WITH CREDENTIALS aws_access_key_id=myaccesskey;aws_secret_access_key=mysecretaccesskey'    JSON AS 'auto';"))

By stepping through pdb, the problem was obviously the lack of a .commit() being invoked. I don't know why session.commit() is not working in your case (maybe the session "lost track" of the sent commands?) so it might not actually fix your problem.

Anyhow, as explained in the sqlalchemy docs

Given this requirement, SQLAlchemy implements its own “autocommit” feature which works completely consistently across all backends. This is achieved by detecting statements which represent data-changing operations, i.e. INSERT, UPDATE, DELETE [...] If the statement is a text-only statement and the flag is not set, a regular expression is used to detect INSERT, UPDATE, DELETE, as well as a variety of other commands for a particular backend.

So, there are 2 solutions, either:

  • text("COPY posts FROM 's3://mybucket/the/key/prefix' WITH CREDENTIALS aws_access_key_id=myaccesskey;aws_secret_access_key=mysecretaccesskey' JSON AS 'auto';").execution_options(autocommit=True).
  • Or, get a fixed version of the redshift dialect... I just opened a PR about it
like image 29
berdario Avatar answered Nov 12 '22 15:11

berdario