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R: remove repeating row entries in gridExtra table

Tags:

r

gridextra

Problem:

I create a table using the gridExtra package:

require("gridExtra")

# Prepare data frame
col1 = c(rep("A", 3), rep("B", 2), rep("C", 5))
col2 = c(rep("1", 4), rep("2", 3), rep("3", 3))
col3 = c(1:10)
df = data.frame(col1, col2, col3)

# Create table
grid.arrange(tableGrob(df, show.rownames=F))

The output:

Default output

Question:

I would like to get rid of the repeating row entries and achieve spanning entries which look like this (this image is a mockup made with Photoshop):

Desired Output

Any ideas how to achieve this programmatically in R?

like image 542
user2030503 Avatar asked Sep 28 '13 17:09

user2030503


1 Answers

I would use gtable, and take advantage of its more flexible framework,

enter image description here

require(gtable)
require(plyr)

## build a rectGrob with parameters
cellRect <- function(fill=NA) 
  rectGrob(gp=gpar(fill=fill, col=NA))

cellText <- function(label, colour="black", 
                     hjust=c("left", "center", "right"), ...) {
  hjust <- match.arg(hjust)
  x <- switch(hjust,
              "left" = 0,
              "center"=0.5,
              "right"=1)
  textGrob(label, x=x, hjust=x, gp=gpar(col=colour, ...))
}


rowMax_units <- function(m){
  do.call(unit.c, apply(m, 1, function(l)
    max(do.call(unit.c, lapply(l, grobHeight)))))
}

colMax_units <- function(m){
  do.call(unit.c, apply(m, 2, function(l)
    max(do.call(unit.c, lapply(l, grobWidth)))))
}

findHeights <- function(l)
  do.call(unit.c, lapply(l,grobHeight))
findWidths <- function(l)
  do.call(unit.c, lapply(l,grobWidth))

## NAs are used to indicate grobs that span multiple cells
gtable_colheader <- function(header, n = NULL, 
                             padding=unit(rep(5,5),"mm"), ...){

  type <- 2L
  if(is.null(n)) n <- max(apply(header, type, length))

  start <- alply(header, type, function(s) which(!is.na(s), TRUE))
  end <- llply(start, function(s) c(s[-1], n+1) - 1 )

  fixed <- rep(seq_along(start), sapply(start, length)) # t,b for rows, l,r for cols

  label <- header[!is.na(header)]

  d <- data.frame(label =  label,
                  start=unlist(start), end=unlist(end), fixed, fixed,
                  stringsAsFactors=FALSE)

  names(d) <- c("label","t","b","l","r")

  ## make grobs
  d$grobs <- lapply(d$label, cellText, hjust="center")
  d$widths <- lapply(d$grobs, grobWidth)
  d$heights <- lapply(d$grobs, grobHeight)

  widths <- dlply(d, names(d)[4], # t if type==1, l if type==2
                  function(d) width=do.call(unit.c, d$widths))
  heights <- dlply(d, names(d)[4],
                   function(d) heights=do.call(unit.c, d$heights))

  ## extract widths and heights relevant to the layout
  attr(d, "widths") <- do.call(unit.c, lapply(widths, max))
  attr(d, "heights") <- heights[[which(sapply(heights, length) == n)]]

  ## create gtable
  g <- gtable()
  g <- gtable_add_cols(g, attr(d,"widths") + padding[1])
  g <- gtable_add_rows(g, attr(d,"heights")+ padding[2])

  ## vertical/horizontal separators
  sgh <- segmentsGrob(x0 = unit(0, "npc"), y0 = unit(0, "npc"),
                      x1 = unit(1, "npc"), y1 = unit(0, "npc"),
                      gp=gpar(lwd=2, col="white"))
  sgv <- segmentsGrob(x0 = unit(1, "npc"), y0 = unit(0, "npc"),
                      x1 = unit(1, "npc"), y1 = unit(1, "npc"),
                      gp=gpar(lwd=2, col="white"))
  d2 <- subset(d, b < n)
  g <- with(d2, gtable_add_grob(g, replicate(length(d2$grobs), sgh, simplify=FALSE),
                                t, l, b, r, z=1, name="seph"))
  g <- gtable_add_grob(g, replicate(ncol(g)-1, sgv, simplify=FALSE),
                       t=1, b=nrow(g),l=seq.int(ncol(g)-1), z=1, name="sepv")
  g <- with(d, gtable_add_grob(g, grobs, t, l, b, r, z=0, name="text"))
  g <- gtable_add_grob(g, rectGrob(gp=gpar(fill="grey90", col="white")), t=1, l=1, 
                       b=nrow(g), r=ncol(g), z=-Inf, name="rect")
  g
}

v <- cbind(c("A", NA, NA, "B", NA, "C", NA, NA, NA, NA),
           c(1, NA, NA, NA, 2, NA, NA, 3, NA, NA),
           seq(1,10))
g2 <- gtable_colheader(v)
header <- paste0("col #",1:3)
head <- lapply(header, textGrob, gp=gpar(fontface="bold"))
w <- do.call(unit.c, lapply(header, stringWidth)) + unit(5, "mm")
h <- max(do.call(unit.c, lapply(head, grobHeight))) + unit(5, "mm")
hg <- gtable_matrix("header",  widths=w, heights=h,
                      grobs=matrix(head, nrow=1))

grid.newpage()
grid.draw(gtable:::rbind_gtable(hg, g2, size="first"))
like image 114
baptiste Avatar answered Oct 01 '22 20:10

baptiste