I'd like to generate some square plots that have arrays of hexagons inside of them, like drawn here. I'd like to plot both regular (geometrically regular) and abnormal hexagon tessellations, so I don't think tools from the "sp" package will work.
Below is my attempt at a regular hexagon tesselation using owin and plot.
library(maptools)
library(spatstat)
twid <- 20
theight <- 20
sideL <- 2
rp1 <- (sideL/2)*sqrt(3)
rp2 <- 2*(sideL/2)*sqrt(3)
rp3 <- 3*sideL
bx <- c(1:floor(twid/rp3))
by <- c(1:floor(theight/rp3))
hex_array1 <- list(bx)
hex_array2 <- list(by)
for(i in 1:ceiling(twid/rp3)){
bx[i] <- list(x=c(0+rp3*i,1+rp3*i,3+rp3*i,4+rp3*i,3+rp3*i,1+rp3*i))
by[i] <- list(y=c(rp1,rp2,rp2,rp1,0,0))
hex_array1[i] <- bx[i]
hex_array2[i] <- by[i]
}
har1 <- list(x=c(0,1,3,4,3,1), y=c(rp1,rp2,rp2,rp1,0,0))
har2 <- list(x=hex_array1,y=hex_array2)
hexig <- owin(poly=list(list(x=c(0,twid,twid,0), y=c(0,0,theight,theight)),
har1, har2
)
)
plot(hexig)
However, the above seems to error out because har2 isn't formatted as a list of lists correctly.
The above is obviously only for a single row of hexagons but I figured once I got the first row I'd just wrap the single row in a for loop that added a set x and y distances for each row. I just can't figure out how to format har2 so that I can directly plug it into owin's poly function.
I'm open to completely changing the way I've done the above, I'm still relatively new to R so I definitely still don't know how to do things the most efficient/elegant way. I'm currently running R version 3.3.2 on Win 10 x64 running RStudio V0.99.903
Any help is appreciated.
Thank you!
I think spatstat
has just the functions you are looking for: hextess
and affine.tess
.
Take a look at the examples for affine.tess
. Here
is an example of what you can do (add trim = FALSE
to avoid the
bounding box):
library(spatstat)
H <- hextess(square(5), 0.2)
plot(H)
shear <- matrix(c(1,0,0.6,1), 2, 2)
sH <- affine(H, shear)
plot(sH)
It might be easier to just do a hexbin plot and then override the coloring (not that it wouldn't be an interesting programming exercise to plot the hexagon tesselation lines directly). For example, using ggplot2:
library(ggplot2)
dat = data.frame(x=runif(5000, 0,10), y=runif(5000,0,10))
# Basic plot
p = ggplot(dat, aes(x,y)) +
geom_hex(colour="black", fill="white", bins=10) +
theme_minimal() +
guides(fill=FALSE) +
scale_y_continuous(limits=c(-0.4,10.6)) +
scale_x_continuous(limits=c(-0.4,10.6)) +
theme(axis.text=element_blank(),
axis.title=element_blank())
# Regular hexagons
p + coord_equal(ratio=1)
# 2:1 aspect ratio
p + coord_equal(ratio=2)
geom_hex
only works with Cartesian coordinates, so this method can only produce hexagons with varying aspect ratios, but not shears or other distortions.
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