Logo Questions Linux Laravel Mysql Ubuntu Git Menu
 

pydicom module not found by python

The error message:

In [1]:

import pydicom as dicomio
---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
<ipython-input-1-102814c2908e> in <module>()
----> 1 import pydicom as dicomio

ImportError: No module named pydicom

To install pydicom I used

conda skeleton pypi pydicom
conda build pydicom

Then uploaded to binstar and used conda install -c to download and install it again. It can now be seen in the anaconda environment.

Lindas-iMac:~ iMacLinda$ conda list -e | grep pydi
pydicom=0.9.9=py27_0

Thank you for your help.

like image 898
Linda Marsh Avatar asked Oct 29 '25 14:10

Linda Marsh


2 Answers

The pydicom package is importable as dicom until version 0.9.9. The documentation on read the docs is for the unreleased master branch version 1.0, in which the package name has changed to pydicom.

Thus, try importing pydicom as:

import dicom

If you need to read a file, you can use the command:

ds = dicom.read_file('filename.dcm')

Once pydicom 1.0 is released, you can follow the wiki page for porting instructions.

like image 112
bastula Avatar answered Oct 31 '25 05:10

bastula


You can us pip:

pip install pydicom

Conda works with pip.

like image 33
Mike Müller Avatar answered Oct 31 '25 04:10

Mike Müller