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numpy: syntax/idiom to cast (n,) array to a (n, 1) array?

I'd like to cast a numpy ndarray object of shape (n,) into one having shape (n, 1). The best I've come up with is to roll my own _to_col function:

def _to_col(a):
    return a.reshape((a.size, 1))

But it is hard for me to believe that such a ubiquitous operation is not already built into numpy's syntax. I figure that I just have not been able to hit upon the right Google search to find it.

like image 807
kjo Avatar asked Oct 03 '11 12:10

kjo


2 Answers

I'd use the following:

a[:,np.newaxis]

An alternative (but perhaps slightly less clear) way to write the same thing is:

a[:,None]

All of the above (including your version) are constant-time operations.

like image 98
NPE Avatar answered Nov 14 '22 08:11

NPE


np.expand_dims is my favorite when I want to add arbitrary axis.

None or np.newaxis is good for code that doesn't need to have flexible axis. (aix's answer)

>>> np.expand_dims(np.arange(5), 0).shape
(1, 5)
>>> np.expand_dims(np.arange(5), 1).shape
(5, 1)

example usage: demean an array by any given axis

>>> x = np.random.randn(4,5)
>>> x - x.mean(1)
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
ValueError: shape mismatch: objects cannot be broadcast to a single shape


>>> ax = 1
>>> x - np.expand_dims(x.mean(ax), ax)
array([[-0.04152658,  0.4229244 , -0.91990969,  0.91270622, -0.37419434],
       [ 0.60757566,  1.09020783, -0.87167478, -0.22299015, -0.60311856],
       [ 0.60015774, -0.12358954,  0.33523495, -1.1414706 ,  0.32966745],
       [-1.91919832,  0.28125008, -0.30916116,  1.85416974,  0.09293965]])
>>> ax = 0
>>> x - np.expand_dims(x.mean(ax), ax)
array([[ 0.15469413,  0.01319904, -0.47055919,  0.57007525, -0.22754506],
       [ 0.70385617,  0.58054228, -0.52226447, -0.66556131, -0.55640947],
       [ 1.05009459, -0.27959876,  1.03830159, -1.23038543,  0.73003287],
       [-1.90864489, -0.31414256, -0.04547794,  1.32587149,  0.05392166]])
like image 28
Josef Avatar answered Nov 14 '22 09:11

Josef