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Multiple lines multiple error bars using ggplot2 in R

I have three csv files which are read into r as dataframes. I want to create a line plot which graphs the "means" columns and uses the "sd" column as an above and below error bar.

This code gives me a multiple lines on a plot but with only one error bar:

ggplot(data=edge_c_summary,aes(x = times,y=means))+
geom_errorbar(aes(ymin=means-sd,ymax=means+sd))+
  geom_line(aes(y=means))+
  geom_line(data = ridge_c_summary,aes(x=times,y=means))+
geom_errorbar(aes(ymin=means-sd,ymax=means+sd))+
geom_line(data = valley_c_summary,aes(x=times,y=means))+
  geom_errorbar(aes(ymin=means-sd,ymax=means+sd))

How can I change this code to make each line have the appropriate error bar for each point?

edge_c_summary

"","times","means","sd"
"1",1,23.6566108007449,0.97897699678658
"12",2,22.7815144766147,1.15800405896118
"19",3,23.3195763580458,1.10152573531062
"20",4,22.3962138084633,1.25626506966065
"21",5,23.0657328322515,1.17624485082946
"22",6,22.1194877505568,1.32888708114411
"23",7,22.9947511929107,1.25304663407105
"24",8,23.121714922049,1.53918225223541
"25",9,25.9304732720463,2.01279986529601
"2",10,27.2791342952275,2.63979959777048
"3",11,28.7510747185261,2.66804271260005
"4",12,29.4782463928968,3.00223132377325
"5",13,29.7261003070624,2.90440605187483
"6",14,30.3099889012209,3.15106156713522
"7",15,29.4545951486163,2.87696770282654
"8",16,29.1991111111111,2.73260690130748
"9",17,27.6885928961749,2.28949704545011
"10",18,26.8358888888889,1.99002819664902
"11",19,25.4207579378628,1.30543445825041
"13",20,24.6197777777778,1.28917282788259
"14",21,24.4374658469945,1.0001400647698
"15",22,23.7050055617353,1.12314557626891
"16",23,23.9770833333333,0.974658804573153
"17",24,23.2177975528365,1.12526920271045
"18",25,23.5250320924262,1.12891528015421

ridge_c_summary

"","times","means","sd"
"1",1,23.681434407626,0.989915240381175
"2",10,26.7027079303675,2.32962251222789
"3",11,27.9654291654292,2.38864888176336
"4",12,28.7457528957529,2.69414439432221
"5",13,28.9534165181224,2.68690267338402
"6",14,29.4438223938224,2.91979342111894
"7",15,28.8215325215325,2.6872152195944
"8",16,28.5877813504823,2.57493709806332
"9",17,27.3870056497175,2.19608259108006
"10",18,26.8308927424534,2.03789359897681
"11",19,25.5481404343945,1.41979111451077
"12",2,23.1454838709677,1.13422699496685
"13",20,24.9886246786632,1.36068090029202
"14",21,24.5601606664683,1.05832239119392
"15",22,24.1409646302251,1.16360525517371
"16",23,24.0566369047619,1.00175077418615
"17",24,23.6077813504823,1.11726702939239
"18",25,23.5780952380952,1.10355334756497
"19",3,23.3004172876304,1.10354221988403
"20",4,22.7314193548387,1.23686119466203
"21",5,23.0191654247392,1.18428611015011
"22",6,22.451935483871,1.29021975136401
"23",7,22.9037125037125,1.26259590667806
"24",8,23.1967741935484,1.48879695691969
"25",9,25.306534006534,1.76717581300979

valley_c_summary

"","times","means","sd"
"1",1,23.6594671201814,1.00814940817697
"2",10,26.0565511411665,2.16929556678063
"3",11,27.7657114295235,2.35397972988285
"4",12,28.3993260320135,2.71926477093656
"5",13,28.8432522492503,2.59319788793986
"6",14,29.1439865433137,2.86403883310426
"7",15,28.7382333333333,2.61080581070595
"8",16,28.488161209068,2.54623846359401
"9",17,27.2384794931644,2.06859192137737
"10",18,26.7695542472666,1.97980925001807
"11",19,25.4289052069426,1.36213237635363
"12",2,23.234375,1.2419107444281
"13",20,25.0288607594937,1.58285604050205
"14",21,24.5043071786311,1.02557712012499
"15",22,24.1491983122363,1.22981051413331
"16",23,24.0402003338898,0.981743823579669
"17",24,23.6662173546757,1.19576801398666
"18",25,23.700081300813,1.0898936548588
"19",3,23.3752591106653,1.08538931168628
"20",4,22.8620981387479,1.32723123739125
"21",5,23.1140421263791,1.16174678633048
"22",6,22.5889264581572,1.39010429942654
"23",7,22.9904,1.22621465254853
"24",8,23.0340371621622,1.48447539690888
"25",9,25.0078692897633,1.60606487763767
like image 871
5r9n Avatar asked Dec 29 '25 05:12

5r9n


2 Answers

Easiest solution is to add an extra column to each data frame for grouping. For example, using dplyr::mutate and dplyr::bind_rows:

library(dplyr)
edge_c_summary %>%
  mutate(source = "edge_c") %>%
  bind_rows(mutate(ridge_c_summary, source = "ridge_c")) %>%
  bind_rows(mutate(valley_c_summary, source = "valley_c")) %>%
  ggplot(aes(times, means) + 
    geom_line(aes(color = source, group = source)) +
    geom_errorbar(aes(ymin = means - sd, ymax = means + sd, color = source))
like image 113
neilfws Avatar answered Dec 30 '25 20:12

neilfws


edge_c_summary <- read.csv(file="edge_c_summary.csv",header=TRUE,sep=",")
ridge_c_summary <- read.csv(file="ridge_c_summary.csv",header=TRUE,sep=",")
valley_c_summary <- read.csv(file="valley_c_summary.csv",header=TRUE,sep=",")

I also added different colors so they are somewhat distinguishable, that you can also ignore if you don't like them.

  ggplot(data=edge_c_summary,aes(x = times,y=means))+
     geom_errorbar(data=edge_c_summary,aes(ymin=means-sd,ymax=means+sd))+
     geom_line(aes(y=means))+
     geom_line(data = ridge_c_summary,aes(x=times,y=means),colour="red")+
     geom_errorbar(data=ridge_c_summary,aes(ymin=means-sd,ymax=means+sd),colour="red")+
     geom_line(data = valley_c_summary,aes(x=times,y=means),colour="blue")+
     geom_errorbar(data=valley_c_summary,aes(ymin=means-sd,ymax=means+sd),colour="blue")

enter image description here

like image 44
tatxif Avatar answered Dec 30 '25 20:12

tatxif