Library is not writable

Question

I have this issue during package installation in R version 3.0.2 (2013-09-25) on an Ubuntu machine:

install.packages("randomForest") Installing package into ‘/usr/local/lib/R/site-library’ (as ‘lib’ is unspecified) Warning in install.packages :   'lib = "/usr/local/lib/R/site-library"' is not writable 

How to resolve it?

Answer 1

For R version 3.2.2 (2015-08-14) this problem should be dealt with since R suggests within the installation process a different path to store your R libraries. The installation looks like this: (Here 'random' is used as an example package)

install.packages('random')  Installing package into ‘/usr/local/lib/R/site-library’ (as ‘lib’ is unspecified) Warning in install.packages("random") : 'lib = "/usr/local/lib/R/site-library"' is not writable  Would you like to use a personal library instead?  (y/n) y  Would you like to create a personal library ~/R/pc-linux-gnu-library/3.2 to install packages into?  (y/n) y 

So during the installation answering both questions with 'y' should install the package correctly.

Update 18/01/19

In case you don't want to store your R packages in an additional file:

As Antoine-Sac and Robert TheSim point out you can add yourself to the staff group in order to be able to write to 'site-library'. (Click on the names to see their important additions)

Before this update I mentioned in this comment the option of changing the permission of the folder 'site-library' using 'chmod o+w' in order to be able to write to it. Assuming security issues but unable to tell at the time I warned about it but have primarily been waiting for somone to clear this up. Antoine-Sac and Robert TheSim have done so in the meantime. Thanks!

Answer 2

add yourself to the group called 'staff'

sudo usermod -a -G staff your_user_name 

replace your_user_name with your login username, then logoff and relogin.

DO NOT use chmod 777 which is a breach of security and btw. a complete non-sense!!!