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New posts in snakemake

How to set binding memory limits in snakemake

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Handling SIGPIPE error in snakemake

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awk command fails in snakemake --use-singularity

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Building a workflow with dynamic input without using deprecated dynamic API

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snakemake: is there a way to specify an output directory for each rule?

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How to use expand in snakemake when some particular combinations of wildcards are not desired?

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SLURM / Sbatch creates many small output files

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How to prevent snakemake from deleting output folders from failed jobs?

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Snakemake slurm ouput file redirect to new directory

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Implementation How to use expand in snakemake when some particular combinations of wildcards are not desired?

python wildcard snakemake

problem with snakemake submitting jobs with multiple wildcard on SGE

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Snakemake: I keep getting The 'conda' command is not available in $PATH. when running on SGE cluster

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Using wildcards in params

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R Draws Plots with Rectangles Instead of Text

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Snakemake wants to run job although output file already exists

python offline snakemake

Symlink (auto-generated) directories via Snakemake

python makefile directory symlink snakemake

Using STAR shared memory module in Snakemake for sequential alignment tasks

python shared-memory snakemake
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