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New posts in snakemake

'No values given for wildcard error' in snakemake

python snakemake

Using Docker with Snakemake (as motivated by the Snakemake documentation) does not provide a true docker container?

docker conda snakemake singularity-container

Force a certain rule to execute at the end

workflow snakemake

Executing checkpoint intermediate Commands

bioinformatics snakemake

Snakemake workflow runs locally but not as github action?

github-actions snakemake

Acess scripts in external snakemake directory without defining absolute path

snakemake

Snakemake: Is it possible to use directories as wildcards?

python bioinformatics pipeline snakemake

Are files defined in the log section of a snakemake rule much different from the ones defined in the output section?

logging snakemake

Snakemake: How to save and access sample details in config.yml file?

python snakemake

RSeQC with multiQC and snakemake

bioinformatics snakemake

Execute certain rule at the very end

workflow snakemake

Snakemake - rule that downloads data

download snakemake

Snakemake perform rules based on configs

snakemake

Snakemake remote rules re-read config file?

automation cluster-computing snakemake hpc

Why Snakemake prefers calling script using script directive instead of calling from shell?

python python-3.x bioinformatics snakemake
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