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New posts in bioinformatics

Appending filename at the end of certain lines in a text file

bash sed bioinformatics fasta

Is there a way to convert a vcf.gz file directly into a vcf.bgz file?

gzip bioinformatics gunzip vcf-variant-call-format

Generate the all possible unique peptides (permutants) in Python/Biopython

python data-science computer-science bioinformatics biopython

DESeq2 "NA values are not allowed" error when any(is.na(counts)) = FALSE

r dataframe bioinformatics

Heatmap.2: add row/column labels on left/top without hard coding coordinates

r bioinformatics heatmap dna-sequence

Heatmap of a huge dataset

python bioinformatics heatmap

Biopython: is there a one-liner to extract the amino acid sequence of a specific chain from a PDB file?

python bioinformatics biopython

Saving the contents of a file generated inside process script into Nextflow variable

bash groovy bioinformatics nextflow

Count number of matching bytes between two _m128i SIMD vectors

c++ bioinformatics sse simd hamming-distance

Remove stop codon from file and replace it with NNN

perl bioinformatics

Implementation of the majority merge algorithm for finding a super-sequence from sub-sequences?

javascript algorithm compression bioinformatics

Converting a data frame using a formula

r dataframe bioinformatics

Quantifying frequency of codons in a transmembrane sequence - apply function?

r apply bioinformatics lapply dna-sequence

How to find if a string has a character which isn't in another string

python string character bioinformatics negation

Find first and last integers in a list of series of numbers

python bioinformatics

Could not locate a Bowtie index corresponding to basename

linux alignment bioinformatics

How to call a variable created in the script in Nextflow?

bash bioinformatics nextflow

How to use Biopython to translate a series of DNA sequences in a FASTA file and extract the Protein sequences into a separate field?

python parsing bioinformatics biopython fasta

Difference between overlap and intersect methods in Pyranges

python bioinformatics pyranges
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