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New posts in bioinformatics
Find points over and under the confidence interval when using geom_stat / geom_smooth in ggplot2
Sep 06, 2022
r
ggplot2
statistics
bioinformatics
How to add to a cnetplot using ggplot functions?
Jul 08, 2022
r
ggplot2
bioinformatics
How can I find multiple motifs(substring) in a protein sequence(string)?
Nov 13, 2022
perl
bioinformatics
How to visualize generated RNA secondary structure
Nov 13, 2022
opengl
visualization
data-visualization
bioinformatics
Hidden Markov Model for three-sided dice
Oct 14, 2019
algorithm
probability
bioinformatics
hidden-markov-models
Trying to parallelize a python algorithm using multithreading and avoiding GIL restrictions
May 26, 2021
python
multithreading
bioinformatics
biopython
gil
GEKKO Infeasible system of ODE equations of a fed-batch Bioreactor
Jun 12, 2022
python
bioinformatics
ode
reactor
gekko
Algorithm optimization to find possible aminoacid sequences with total mass m [duplicate]
Jan 16, 2022
python
optimization
python-3.x
bioinformatics
How can I make my Python script faster?
Oct 22, 2022
python
performance
bioinformatics
fastq
Issue with parsing publication data from PubMed with Entrez
Oct 26, 2019
python
bioinformatics
biopython
pubmed
Can Biopython perform Seq.find() accounting for ambiguity codes
Nov 15, 2022
python
bioinformatics
biopython
How to read very large files line by line matching patterns in R
Oct 05, 2021
r
bigdata
bioinformatics
How to combine similar strings showing most common characters
Jan 01, 2022
r
string
bioinformatics
How does bootstrapping improve the quality of a phylogenetic reconstruction?
Nov 07, 2022
algorithm
bioinformatics
phylogeny
Are there any existing solutions for creating a generic DNA sequence database with a website front end?
Nov 08, 2022
database
search
web
bioinformatics
dna-sequence
running BLAST (bl2seq) without creating sequence files
Nov 05, 2022
python
perl
unix
shell
bioinformatics
How to aggregate values over a bigger than RAM gzip'ed csv file?
Oct 24, 2022
python
csv
gzip
bioinformatics
vcf-variant-call-format
How to parse a file, create records and perform manipulations on records including frequency of terms and distance calculations
Dec 09, 2017
perl
hash
bioinformatics
python counting number of presence and absence of substrings in list of sequences
Nov 01, 2022
python
string
numpy
scipy
bioinformatics
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