I have a shiny app that selects xlsx/csv file and uploads it to the system and after uploading, I wish to populate the column names of the data table that I have extracted to a selectInput()
or selectizeInput()
.
The below code represents an event of user uploading the data file
ui.R
library(markdown)
require(XLConnect)
shinyUI(navbarPage(img(class="img-polaroid",
src=paste0("http://www.iconsdb.com/icons/preview/black/stackoverflow-5-xl.png")),
tabPanel("Table",
titlePanel("Select Data"),
sidebarLayout(
sidebarPanel(
selectInput("fileType", "Select File Type:",
c("MS Excel Worksheet (xls,xlsx)" = "xls",
"Text/CSV (.csv)" = "csv"
)
),
fileInput('file1', 'Choose file to upload',
accept = c(
'text/csv',
'text/comma-separated-values',
'text/tab-separated-values',
'text/plain',
'.csv',
'.tsv',
'application/vnd.ms-excel',
'application/vnd.openxmlformats-officedocument.spreadsheetml.sheet',
'.xlsx',
'.xls'
)
),
tags$hr(),
checkboxInput('header', 'Header', TRUE),
radioButtons('sep', 'Separator',
c(Comma=',',
Semicolon=';',
Tab='\t'),
','),
radioButtons('quote', 'Quote',
c(None='',
'Double Quote'='"',
'Single Quote'="'"),
'"'),
tags$hr()
),
mainPanel(
dataTableOutput('table')
)
)
),
tabPanel("Plot",
sidebarLayout(
sidebarPanel(
radioButtons("plotType", "Plot type",
c("Scatter"="p", "Line"="l")
)
),
mainPanel(
plotOutput("plot")
)
)
),
navbarMenu("More",
tabPanel("Summary",
verbatimTextOutput("summary")
)
)
))
server.R
shinyServer(
function(input, output, session)
{
output$plot <- renderPlot({
plot(data$Count,data$Sales, type=input$plotType)
})
output$summary <- renderPrint({
summary(data)
})
output$table <- renderDataTable({
inFile <- input$file1
if (is.null(inFile))
return(NULL)
if(input$fileType=='csv'){
table1<-read.csv(inFile$datapath, header = input$header,
sep = input$sep, quote = input$quote)
return(table1)
} else if(input$fileType=='xls'){
table1 <- readWorksheetFromFile(inFile$datapath, sheet=1)
}
})
}
)
Fair enough, I have now a working system of inputs that can take a data from Excel source or a text/CSV. Thereafter, I wish to create a dynamic list which would pass the values of colnames(output$table)
to my ui.R and put it in the designated spot.
How do I do it?
I have tried using uiOutput()
from Mason DeCamillis's answer to How to get vector of options from server.R to ui.R for selectInput in Shiny R App but R is throwing me a "Object not found" error.
Also, it occurred to me that I must use reactive()
to be able to pass data to and fro to UI and server. But no clue, how do I do it.
You can store the uploaded table in a data
variable in your server.R
and use the code from the link you posted to fill the selectInput
.
In your server.R
, you could do:
data <- reactive({
inFile <- input$file1
if (is.null(inFile))
return(NULL)
if(input$fileType=='csv'){
table1<-read.csv(inFile$datapath, header = input$header,
sep = input$sep, quote = input$quote)
return(table1)
} else if(input$fileType=='xls'){
table1 <- readWorksheetFromFile(inFile$datapath, sheet=1)
}
})
output$table <- renderDataTable({
data()
})
output$selector <- renderUI({
selectInput("var", "Choose name:", as.list(colnames(data())))
})
and in your ui.R
, add uiOutput("selector")
where you want the list to be.
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