I would create a tar.gz file from R. But the tar function doesn't work me. This is my example code.
writeLines('aaaa', 'tmp.txt')
tar('tmp.tar.gz', 'tmp.txt', compression = 'gzip')
This code creates a tmp.tar.gz, but tmp.txt doesn't include in the gz file.
Are there any mistakes in my code?
Thanks for any suggestions.
I run this code in windows and linux:
#Windows platform
sessionInfo()
R version 3.1.0 (2014-04-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
locale:
[1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252
[3] LC_MONETARY=English_Australia.1252 LC_NUMERIC=C
[5] LC_TIME=English_Australia.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] tools_3.1.0
#Linux platform
sessionInfo()
R version 3.1.0 (2014-04-10)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=C LC_COLLATE=C
[5] LC_MONETARY=C LC_MESSAGES=C LC_PAPER=C LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=C LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] weaana_0.1.0.3874 abind_1.4-0 reshape2_1.4 ncdf4cf_0.1.0.3698 ncdf4_1.10
[6] stringr_0.6.2 My_0.1.0.4086
loaded via a namespace (and not attached):
[1] Rcpp_0.11.1 plyr_1.8.1 tools_3.1.0
To create a tar file, use the cvf command line option, list the name of the resulting tar file first followed by a directory whose contents you want to tar-up. If you forget to list the tar file target (hw10. tar) in the tar command, tar will exit with an error message.
I guess you do not have set the "tar"
environmental variable. The default argument of tar()
called tar
is set by a call to Sys.getenv("tar")
. If it is an empty string, then R's internal tar
is used (it doesn't work on my system either).
So, you may either Sys.setenv
the "tar"
variable, or provide the name of external tar
command/path manually:
tar('tmp.tar.gz', 'tmp.txt', compression = 'gzip', tar="tar")
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