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How can I load a specific version of R in linux?

Tags:

linux

r

ubuntu

R 3.0 is my default version. I have R 2.14 installed and want to use that due to package dependencies. Note the packages cannot be built for 3.0. How can I force ubuntu to load the earlier version?

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conjectures Avatar asked Nov 12 '14 21:11

conjectures


1 Answers

You set the PATH accordingly. There are tools / libraries that do that for you (common in university environments with multiple versions of things in /usr/local/ or /opt.

Here is a simple ad-hoc version:

edd@max:~$ which R                 # my default R
/usr/bin/R
edd@max:~$ R --version | head -1
R version 3.1.2 (2014-10-31) -- "Pumpkin Helmet"
edd@max:~$ cat bin/R-devel.sh      # a wrapper I use
#!/bin/bash
export PATH="/usr/local/lib/R-devel/bin:$PATH"
R "$@"
edd@max:~$                         # gives me another R
edd@max:~$ R-devel.sh --version | head -1
R Under development (unstable) (2014-11-11 r66970) -- "Unsuffered Consequences"
edd@max:~$ 
edd@max:~$ ( PATH="/usr/local/lib/R-devel/bin:$PATH"  R --version | head -1 )
R Under development (unstable) (2014-11-11 r66970) -- "Unsuffered Consequences"
edd@max:~$ 

The change at the can be done by a script or in different ways -- the key is that by pre-prending PATH with the one for the version you want, you end up with that version found first.

like image 61
Dirk Eddelbuettel Avatar answered Nov 08 '22 08:11

Dirk Eddelbuettel