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Finding common elements between multiple dataframe columns

Hope you could help me. I am new to python and pandas, so please bear with me. I am trying to find the common word between three data frames and I am using Jupiter Notebook.

Just for example:

df1=
A
dog
cat
cow 
duck
snake

df2=
A
pig
snail
bird
dog

df3=
A
eagle
dog 
snail
monkey

There is only one column in all data frames that is A. I would like to find

  1. the common word among all columns
  2. the words that are unique to their own columns and not in common.

Example:

duck is unique to df1, snail is unique to df2 and monkey is unique to df3.

I am using the below code to some use but not getting what I want straightforward,

df1[df1['A'].isin(df2['A']) & (df2['A']) & (df3['A'])]

Kindly let me know where I am going wrong. Cheers

like image 269
Tikku Avatar asked Oct 04 '17 02:10

Tikku


2 Answers

Simplest way is to use set intersection

list(set(df1.A) & set(df2.A) & set(df3.A))

['dog']

However if you have a long list of these things, I'd use reduce from functools. This same technique can be used with @cᴏʟᴅsᴘᴇᴇᴅ's use of np.intersect1d as well.

from functools import reduce

list(reduce(set.intersection, map(set, [df1.A, df2.A, df3.A])))

['dog']
like image 126
piRSquared Avatar answered Nov 13 '22 08:11

piRSquared


The problem with your current approach is that you need to chain multiple isin calls. What's worse is that you'd need to keep track of which dataframe is the largest, and you call isin on that one. Otherwise, it doesn't work.

To make things easy, you can use np.intersect1d:

>>> np.intersect1d(df3.A, np.intersect1d(df1.A, df2.A))
array(['dog'], dtype=object)

Similar method using functools.reduce + intersect1d by piRSquared:

>>> from functools import reduce # python 3 only
>>> reduce(np.intersect1d, [df1.A, df2.A, df3.A])
array(['dog'], dtype=object)
like image 7
cs95 Avatar answered Nov 13 '22 06:11

cs95