I have a data frame in R like this. I would like to extract the last visit for each subject.
SUBJID VISIT
40161 3
40161 4
40161 5
40161 6
40161 9
40201 3
40202 6
40202 8
40241 3
40241 4
The desired output is as follows
SUBJID VISIT
40161 9
40201 3
40202 8
How should I do this in R? Thanks very much for your help.
While agstudy is correct, there is another way with the stats package and the aggregate function.
df <- read.table(text="SUBJID VISIT
40161 3
40161 4
40161 5
40161 6
40161 9
40201 3
40202 6
40202 8
40241 3
40241 4", header=TRUE)
aggregate(VISIT ~ SUBJID, df, max)
SUBJID VISIT
1 40161 9
2 40201 3
3 40202 8
4 40241 4
To show another alternative, because I like the simplicity of its syntax, you can use data.table
too. Assuming your data.frame
is called "df":
library(data.table)
# data.table 1.8.7 For help type: help("data.table")
DT <- data.table(df, key = "SUBJID")
DT[, list(VISIT = max(VISIT)), by = key(DT)]
# SUBJID V1
# 1: 40161 9
# 2: 40201 3
# 3: 40202 8
# 4: 40241 4
And, while we are sharing the many ways to do this in R, if you're comfortable with SQL syntax, you can also use sqldf
as follows:
library(sqldf)
sqldf("select SUBJID, max(VISIT) `VISIT` from df group by SUBJID")
SUBJID VISIT
1 40161 9
2 40201 3
3 40202 8
4 40241 4
Because we can, another base option:
do.call(rbind,
lapply(split(dat, dat$SUBJID),
function(x) tail(x$VISIT, 1) ) )
# [,1]
#40161 9
#40201 3
#40202 8
#40241 4
EDIT
As @BenBolker suggests:
do.call(rbind,
lapply(split(dat, dat$SUBJID),
function(x) tail(x, 1) ) )
should work for all columns if you have more.
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