I am trying to make a plot/graph of deep learning model in Python using Keras package but unfortunately it keeps giving me an error which is not very informative.
I run python on Linux with Python 3.5.2, Anaconda 4.2.0, Keras 2.1.6 and I use tensorflow-gpu 1.7.0 Backend.
Here is the error message:
keras.utils.plot_model(unet, to_file='model.png', show_shapes=False, show_layer_names=True, rankdir='TB')
['dot', '-Tps', '/tmp/tmphesl1j0c'] return code: 127
stdout, stderr:
b''
b'dot: error while loading shared libraries: libexpat.so.0: cannot open shared object file: No such file or directory\n'
---------------------------------------------------------------------------
AssertionError Traceback (most recent call last)
<ipython-input-9-60bb0e3b97bd> in <module>()
----> 1 keras.utils.plot_model(unet, to_file='model.png', show_shapes=False, show_layer_names=True, rankdir='TB')
/.../anaconda3-4.2.0/lib/python3.5/site-packages/keras/utils/vis_utils.py in plot_model(model, to_file, show_shapes, show_layer_names, rankdir)
132 'LR' creates a horizontal plot.
133 """
--> 134 dot = model_to_dot(model, show_shapes, show_layer_names, rankdir)
135 _, extension = os.path.splitext(to_file)
136 if not extension:
/.../anaconda3-4.2.0/lib/python3.5/site-packages/keras/utils/vis_utils.py in model_to_dot(model, show_shapes, show_layer_names, rankdir)
53 from ..models import Sequential
54
---> 55 _check_pydot()
56 dot = pydot.Dot()
57 dot.set('rankdir', rankdir)
/.../anaconda3-4.2.0/lib/python3.5/site-packages/keras/utils/vis_utils.py in _check_pydot()
24 # Attempt to create an image of a blank graph
25 # to check the pydot/graphviz installation.
---> 26 pydot.Dot.create(pydot.Dot())
27 except OSError:
28 raise OSError(
/.../anaconda3-4.2.0/lib/python3.5/site-packages/pydot.py in create(self, prog, format, encoding)
1882 out=stdout_data,
1883 err=stderr_data))
-> 1884 assert p.returncode == 0, p.returncode
1885 return stdout_data
AssertionError: 127
I would really appreciate if somebody could help me with this error.
Note: both pydot and graphviz are intalled
For me solution was to import like this:
from keras.utils.vis_utils import plot_model
I changed keras.utils to tensorflow.keras.utils and it helped me
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