Sorry for not included any example data for my problem. I couldn’t find a way to easily produce an example shape file. Hopefully, experienced users of ggplot
can see what I’d like to do from the description below.
I’ve got:
A data.frame
X with information about sample plots (plotid
, var1
, var2
, var3
, var4
, …)
A polygon shapefile Y
with spatial information for the sample plots
Importation of the shapefile Y
(with maptools
) and fortify
ing as data.frame
Z
(ggplot2
) works fine. melt
ing X
to X_melted
works equally fine. merge
-ing Z
and X_melted
to mapdf
works as well.
That means that now we have a data.frame
in long form with spatial information and var1
, var2
, var3
, …
Now I want to plot this data frame like this:
pl1 <- ggplot(mapdf,aes(long,lat),group=group)
pl1 <- pl1 + geom_polygon(aes(group=group,fill=value),colour="black")
pl1 <- pl1 + facet_grid(variable ~ .)
pl1 <- pl1 + coord_equal(ratio = 1)
pl1
The result is a nice plot with one panel for each variable. The maps of the panels are identical, but fill colour varies with the values of the variables. Up to now, everything works like a charm… with one problem:
The variables have different min and max values. For example var1
goes from 0
to 5
, var2
from 0
to 400
, var3
from 5
to 10
, etc. In that example, the legend for the fill colour goes from 0
to 400
. var2
is nicely drawn, but var1
and var3
are basically in the same colour.
Is there a way I could use a different legend for each panel of the facet? Or is this simply not (yet) possible with facet_wrap
or facet_grid
in ggplot
?
I could make individual plots for each variable and join them with viewports, but there a plenty of variables and this would be a lot of work.
Or is there maybe another package or method I could use to accomplish what I’d like to do?
And help would be very much appreciated. :)
Edit:
With the help of the ggplot2
-package description, I constructed an example that illustrates my problem:
ids <- factor(c("1.1", "2.1", "1.2", "2.2", "1.3", "2.3"))
values <- data.frame(
id = ids,
val1 = cumsum(runif(6, max = 0.5)),
val2 = cumsum(runif(6, max = 50))
)
positions <- data.frame(
id = rep(ids, each = 4),
x = c(2, 1, 1.1, 2.2, 1, 0, 0.3, 1.1, 2.2, 1.1, 1.2, 2.5, 1.1, 0.3,
0.5, 1.2, 2.5, 1.2, 1.3, 2.7, 1.2, 0.5, 0.6, 1.3),
y = c(-0.5, 0, 1, 0.5, 0, 0.5, 1.5, 1, 0.5, 1, 2.1, 1.7, 1, 1.5,
2.2, 2.1, 1.7, 2.1, 3.2, 2.8, 2.1, 2.2, 3.3, 3.2)
)
values <- melt(values)
datapoly <- merge(values, positions, by=c("id"))
p <- ggplot(datapoly, aes(x=x, y=y)) + geom_polygon(aes(fill=value, group=id),colour="black")
p <- p + facet_wrap(~ variable)
p
The panel on the right illustrates different values for var2
on the map. On the panel on the left however, all polygons have the same colour. This is logical, because only one colour gradient is used for all panels. Could I use a different colour gradient for each panel?
To create the legend for a plot in base R, we can use legend function and if the background color of the legends needs to be changed from white to any other then bg argument in legend function will be used. For example, to change the background color to red then we can use bg="red".
You can place the legend literally anywhere. To put it around the chart, use the legend. position option and specify top , right , bottom , or left . To put it inside the plot area, specify a vector of length 2, both values going between 0 and 1 and giving the x and y coordinates.
Faceting is the process that split the chart window in several small parts (a grid), and display a similar chart in each section. Each section usually shows the same graph for a specific group of the dataset. The result is usually called small multiple.
The facet approach partitions a plot into a matrix of panels. Each panel shows a different subset of the data.
Currently there can be only one scale per plot (for everything except x and y).
With grid goodness
align.plots <- function(..., vertical=TRUE){
#http://ggextra.googlecode.com/svn/trunk/R/align.r
dots <- list(...)
dots <- lapply(dots, ggplotGrob)
ytitles <- lapply(dots, function(.g) editGrob(getGrob(.g,"axis.title.y.text",grep=TRUE), vp=NULL))
ylabels <- lapply(dots, function(.g) editGrob(getGrob(.g,"axis.text.y.text",grep=TRUE), vp=NULL))
legends <- lapply(dots, function(.g) if(!is.null(.g$children$legends))
editGrob(.g$children$legends, vp=NULL) else ggplot2:::.zeroGrob)
gl <- grid.layout(nrow=length(dots))
vp <- viewport(layout=gl)
pushViewport(vp)
widths.left <- mapply(`+`, e1=lapply(ytitles, grobWidth),
e2= lapply(ylabels, grobWidth), SIMPLIFY=F)
widths.right <- lapply(legends, function(g) grobWidth(g) + if(is.zero(g)) unit(0, "lines") else unit(0.5, "lines")) # safe margin recently added to ggplot2
widths.left.max <- max(do.call(unit.c, widths.left))
widths.right.max <- max(do.call(unit.c, widths.right))
for(ii in seq_along(dots)){
pushViewport(viewport(layout.pos.row=ii))
pushViewport(viewport(x=unit(0, "npc") + widths.left.max - widths.left[[ii]],
width=unit(1, "npc") - widths.left.max + widths.left[[ii]] -
widths.right.max + widths.right[[ii]],
just="left"))
grid.draw(dots[[ii]])
upViewport(2)
}
}
p <- ggplot(datapoly[datapoly$variable=="val1",], aes(x=x, y=y)) + geom_polygon(aes(fill=value, group=id),colour="black")
p1 <- ggplot(datapoly[datapoly$variable=="val2",], aes(x=x, y=y)) + geom_polygon(aes(fill=value, group=id),colour="black")
align.plots( p,p1)
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